Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.36□□□□□ -1.71
RFT1Q96AA3 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.36□□□□□ -1.71
RFT1Q96AA3 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.36□□□□□ -1.71
RFT1Q96AA3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.36□□□□□ -1.71
RFT1Q96AA3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
RFT1Q96AA3 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RFT1Q96AA3 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFT1Q96AA3 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.36□□□□□ -1.71
RFT1Q96AA3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.36□□□□□ -1.71
RFT1Q96AA3 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RFT1Q96AA3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.36□□□□□ -1.71
RFT1Q96AA3 AC011493.1-201ENST00000596753 1632 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFT1Q96AA3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFT1Q96AA3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFT1Q96AA3 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFT1Q96AA3 AC008549.2-201ENST00000333482 706 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 RN7SKP104-201ENST00000362605 328 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RFT1Q96AA3 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFT1Q96AA3 SNORA17A-201ENST00000391185 133 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 RPL23AP48-201ENST00000406913 488 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 HMGB3P31-201ENST00000413333 595 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 RPL21P108-201ENST00000413857 481 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 AC002069.1-201ENST00000429649 1159 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 RPS27P18-201ENST00000431701 247 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 MOB1AP2-201ENST00000446060 614 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 RPL31P44-201ENST00000447680 377 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 RPS27AP2-201ENST00000457576 465 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 AC023141.9-201ENST00000458734 412 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 RPL23AP37-201ENST00000479658 549 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 STMN1P2-201ENST00000508435 439 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 AC121161.1-201ENST00000510606 652 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 AC079395.2-201ENST00000610982 737 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 AC006249.1-201ENST00000621223 471 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 AP002371.2-201ENST00000624450 503 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 SNORA17.5-201ENST00000630429 132 ntBASIC4.35□□□□□ -1.71
RFT1Q96AA3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFT1Q96AA3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RFT1Q96AA3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFT1Q96AA3 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFT1Q96AA3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.35□□□□□ -1.71
RFT1Q96AA3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RFT1Q96AA3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RFT1Q96AA3 AL672167.1-203ENST00000641299 2975 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 MIR16-2-201ENST00000362117 81 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 RNU1-83P-201ENST00000363426 164 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 SNORD56.4-201ENST00000363883 71 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 GSTM3P2-201ENST00000412746 530 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 CEACAMP8-201ENST00000413902 580 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 NPM1P24-201ENST00000428039 894 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 BX323845.1-201ENST00000432417 179 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 AL031663.1-201ENST00000437445 219 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 TXNP5-201ENST00000441043 315 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.34□□□□□ -1.71
RFT1Q96AA3 RPL7P55-201ENST00000450522 746 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 MTND2P8-201ENST00000450555 1025 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 AL935212.3-201ENST00000450729 284 ntBASIC4.34□□□□□ -1.71
RFT1Q96AA3 AL691482.1-201ENST00000453255 87 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms