Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL353093.1-201ENST00000441292 436 ntBASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AL596266.1-201ENST00000448132 400 ntBASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AC012123.2-201ENST00000485809 248 ntBASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 OR5AM1P-201ENST00000532136 1032 ntBASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 MTND4LP24-201ENST00000572277 291 ntBASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AP005403.1-201ENST00000579720 229 ntBASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AC002069.2-201ENST00000603580 883 ntBASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AL627230.1-201ENST00000613077 211 ntBASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AL591926.8-201ENST00000616876 211 ntBASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 SEC63P2-201ENST00000503863 1939 ntBASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AC003973.3-201ENST00000624863 2822 ntBASIC6.34□□□□□ -1.4
SMC1BQ8NDV3 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
SMC1BQ8NDV3 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
SMC1BQ8NDV3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SMC1BQ8NDV3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.34□□□□□ -1.4
SMC1BQ8NDV3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SMC1BQ8NDV3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.34□□□□□ -1.4
SMC1BQ8NDV3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 AL355834.1-201ENST00000556602 3965 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 RNU6-549P-201ENST00000384433 107 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 NUDT19P3-201ENST00000404698 555 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 HMGB3P18-201ENST00000406327 590 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 LINC01881-201ENST00000416103 412 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 AL389915.1-201ENST00000422463 466 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 RHOT1P3-201ENST00000436571 331 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 AC002542.1-201ENST00000440683 193 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 PTENP1-201ENST00000447117 1215 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 AC112492.1-201ENST00000449607 712 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 RPL7AP10-201ENST00000481016 791 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 AK3P4-201ENST00000504283 583 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 AC097486.1-201ENST00000515331 210 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 PMS2P3-207ENST00000529061 717 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 AC027104.1-201ENST00000563702 681 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 AL020997.3-201ENST00000602843 359 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 LINC01808-202ENST00000641680 1116 ntBASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMC1BQ8NDV3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AC017079.1-201ENST00000333650 415 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 RNU6-532P-201ENST00000384318 107 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 HSPA8P15-201ENST00000401676 786 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AL034374.1-201ENST00000406329 351 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AC009237.10-201ENST00000414112 510 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AC009237.5-201ENST00000414271 501 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 OR6K4P-201ENST00000423179 955 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 DPY19L1P2-201ENST00000426647 915 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AC016027.5-201ENST00000427227 210 ntBASIC6.32□□□□□ -1.4
SMC1BQ8NDV3 AL451062.2-201ENST00000427515 271 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms