Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 MIR6861-201ENST00000618657 64 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4□□□□□ -1.77
CCDC58Q4VC31 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4□□□□□ -1.77
CCDC58Q4VC31 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4□□□□□ -1.77
CCDC58Q4VC31 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4□□□□□ -1.77
CCDC58Q4VC31 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4□□□□□ -1.77
CCDC58Q4VC31 CYP1D1P-201ENST00000416662 1433 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 MFSD4BP1-201ENST00000513330 1552 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 VPS35P1-201ENST00000563400 1518 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4□□□□□ -1.77
CCDC58Q4VC31 ZNF962P-201ENST00000443465 3140 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AC139769.1-204ENST00000472297 1931 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AC007342.7-201ENST00000624610 2337 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AC114546.3-201ENST00000623582 1734 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 MGP-201ENST00000228938 694 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 RPL23P2-201ENST00000320371 421 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 RPL5P19-201ENST00000404228 893 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 RNU6ATAC7P-201ENST00000408111 127 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 RNA5SP306-201ENST00000411087 107 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 FHP1-201ENST00000442741 703 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AC092647.3-201ENST00000443044 633 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 MTND2P25-201ENST00000449028 610 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AURKAPS1-201ENST00000451805 1212 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 SETP20-201ENST00000457046 852 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 OR5M7P-201ENST00000526140 972 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 GCSHP4-201ENST00000538792 439 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AC105129.1-201ENST00000560250 297 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AC124068.1-201ENST00000563131 678 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 RPL23AP97-201ENST00000568955 471 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AC090181.2-201ENST00000602975 672 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AL135786.2-201ENST00000608422 615 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AL031666.3-201ENST00000609320 1006 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 AC000123.2-201ENST00000623124 461 ntBASIC3.99□□□□□ -1.77
CCDC58Q4VC31 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC58Q4VC31 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 LINC00622-201ENST00000562811 1570 ntBASIC3.98□□□□□ -1.77
CCDC58Q4VC31 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 MIR423-201ENST00000362201 94 ntBASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 NRBF2P3-201ENST00000432731 865 ntBASIC3.98□□□□□ -1.77
CCDC58Q4VC31 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AC010733.1-201ENST00000451515 401 ntBASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AC104763.1-201ENST00000475274 360 ntBASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AC091905.4-201ENST00000623432 202 ntBASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AC007546.2-201ENST00000623996 360 ntBASIC3.98□□□□□ -1.77
CCDC58Q4VC31 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AC009452.1-201ENST00000640823 606 ntBASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AC090017.1-201ENST00000548612 1779 ntBASIC3.98□□□□□ -1.77
CCDC58Q4VC31 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC58Q4VC31 AC097504.1-201ENST00000515103 2415 ntBASIC3.97□□□□□ -1.77
CCDC58Q4VC31 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCDC58Q4VC31 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms