Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.85□□□□□ -1.63
SRSF4Q08170 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.85□□□□□ -1.63
SRSF4Q08170 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.85□□□□□ -1.63
SRSF4Q08170 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.85□□□□□ -1.63
SRSF4Q08170 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SRSF4Q08170 SUMO2P14-201ENST00000604488 293 ntBASIC4.85□□□□□ -1.63
SRSF4Q08170 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SRSF4Q08170 LARP7P1-201ENST00000605576 316 ntBASIC4.85□□□□□ -1.63
SRSF4Q08170 AC090186.1-201ENST00000605991 572 ntBASIC4.85□□□□□ -1.63
SRSF4Q08170 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.85□□□□□ -1.63
SRSF4Q08170 AC073869.7-201ENST00000640874 297 ntBASIC4.85□□□□□ -1.63
SRSF4Q08170 OR11H2-202ENST00000641517 1085 ntBASIC4.85□□□□□ -1.63
SRSF4Q08170 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SRSF4Q08170 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SRSF4Q08170 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SRSF4Q08170 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SRSF4Q08170 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRSF4Q08170 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRSF4Q08170 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRSF4Q08170 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SRSF4Q08170 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.84□□□□□ -1.63
SRSF4Q08170 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRSF4Q08170 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.84□□□□□ -1.63
SRSF4Q08170 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRSF4Q08170 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRSF4Q08170 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.84□□□□□ -1.63
SRSF4Q08170 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.84□□□□□ -1.63
SRSF4Q08170 RBPJP7-201ENST00000442803 1447 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 RBPJP5-201ENST00000449433 1447 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 RBMY1HP-201ENST00000382759 1389 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.84□□□□□ -1.63
SRSF4Q08170 MTND4P31-201ENST00000425607 1343 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRSF4Q08170 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.84□□□□□ -1.63
SRSF4Q08170 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.84□□□□□ -1.63
SRSF4Q08170 RNU6-1200P-201ENST00000384162 107 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 RNU6-31P-201ENST00000384388 108 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 MIR1203-201ENST00000408812 85 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 RNA5SP156-201ENST00000410250 110 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 RN7SKP286-201ENST00000410894 299 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 RNU6-920P-201ENST00000410926 92 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 AC027644.1-201ENST00000419595 298 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRSF4Q08170 NDUFB4P8-201ENST00000435351 367 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.84□□□□□ -1.63
SRSF4Q08170 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC4.84□□□□□ -1.63
SRSF4Q08170 AC005077.1-201ENST00000449226 375 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 CFL1P4-201ENST00000451536 498 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.84□□□□□ -1.63
SRSF4Q08170 RN7SL515P-201ENST00000463999 297 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.84□□□□□ -1.63
SRSF4Q08170 AC116353.2-201ENST00000505332 712 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.84□□□□□ -1.63
SRSF4Q08170 AC008638.1-201ENST00000506035 866 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.84□□□□□ -1.63
SRSF4Q08170 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.84□□□□□ -1.63
SRSF4Q08170 AC098976.1-201ENST00000513014 541 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 MIR2117-201ENST00000516780 80 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC4.84□□□□□ -1.63
SRSF4Q08170 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 OR8A2P-201ENST00000528631 952 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 AC016957.1-201ENST00000534895 309 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.84□□□□□ -1.63
SRSF4Q08170 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.84□□□□□ -1.63
SRSF4Q08170 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC4.84□□□□□ -1.63
SRSF4Q08170 SERPINE4P-201ENST00000554978 281 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SRSF4Q08170 AC116553.2-201ENST00000564203 463 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 AC012414.6-201ENST00000568241 401 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.84□□□□□ -1.63
SRSF4Q08170 ISCA1P3-201ENST00000577104 373 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.84□□□□□ -1.63
SRSF4Q08170 AC087683.1-201ENST00000591187 441 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 AC022146.1-201ENST00000595307 847 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 AF250324.2-201ENST00000608299 610 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SRSF4Q08170 uc_338.26-201ENST00000612659 160 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 AL445670.1-201ENST00000618889 801 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 AL356121.2-201ENST00000624715 780 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.84□□□□□ -1.63
SRSF4Q08170 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.84□□□□□ -1.63
SRSF4Q08170 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SRSF4Q08170 AC011933.2-201ENST00000578539 2790 ntBASIC4.84□□□□□ -1.63
SRSF4Q08170 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.64
SRSF4Q08170 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.84□□□□□ -1.64
SRSF4Q08170 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.83□□□□□ -1.64
SRSF4Q08170 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 NEPNP-201ENST00000404786 1371 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 AC132825.1-201ENST00000463573 2247 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 NACA3P-201ENST00000359690 648 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 U3.4-201ENST00000363352 213 ntBASIC4.83□□□□□ -1.64
SRSF4Q08170 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SRSF4Q08170 Y_RNA.465-201ENST00000384293 102 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms