Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AL133268.1-201ENST00000405676 1401 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
GABPAQ06546 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
GABPAQ06546 SNORA70C-201ENST00000384538 135 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 AL161909.1-201ENST00000397390 712 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.17□□□□□ -1.58
GABPAQ06546 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.17□□□□□ -1.58
GABPAQ06546 MAPRE1P3-201ENST00000435438 796 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.17□□□□□ -1.58
GABPAQ06546 AC009963.2-201ENST00000453431 138 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.17□□□□□ -1.58
GABPAQ06546 RPL7P19-201ENST00000469948 618 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.17□□□□□ -1.58
GABPAQ06546 RPL35P6-201ENST00000490024 372 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GABPAQ06546 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.17□□□□□ -1.58
GABPAQ06546 AC108475.1-201ENST00000507880 950 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.17□□□□□ -1.58
GABPAQ06546 AC008958.1-201ENST00000511047 682 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.17□□□□□ -1.58
GABPAQ06546 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.17□□□□□ -1.58
GABPAQ06546 MRPL49P2-201ENST00000521066 465 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.17□□□□□ -1.58
GABPAQ06546 OR5BC1P-201ENST00000529327 739 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 AL109766.1-201ENST00000555080 552 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 AC009268.1-201ENST00000561352 1203 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 RN7SL435P-201ENST00000584418 282 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 AC006363.1-201ENST00000603806 463 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 AL354984.3-201ENST00000604803 325 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 AC067838.1-201ENST00000606064 577 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
GABPAQ06546 AL590410.1-201ENST00000617925 333 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 AC009704.2-201ENST00000618739 483 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
GABPAQ06546 NOL8P1-201ENST00000508336 3529 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
GABPAQ06546 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.17□□□□□ -1.58
GABPAQ06546 AC107068.1-201ENST00000563286 4218 ntBASIC5.17□□□□□ -1.58
GABPAQ06546 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
GABPAQ06546 THAP12P5-201ENST00000405864 2275 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
GABPAQ06546 AL121657.1-201ENST00000327215 531 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 AC097374.1-203ENST00000400783 485 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 DHFRP5-201ENST00000406944 564 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.16□□□□□ -1.58
GABPAQ06546 AJ239321.1-201ENST00000424255 564 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
GABPAQ06546 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.16□□□□□ -1.58
GABPAQ06546 Z85994.2-201ENST00000434327 452 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 RPL12P18-201ENST00000437175 325 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 AL445433.1-201ENST00000457507 257 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 AC108751.2-201ENST00000469993 231 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
GABPAQ06546 ATP1B1P1-201ENST00000509767 915 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.16□□□□□ -1.58
GABPAQ06546 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.16□□□□□ -1.58
GABPAQ06546 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.16□□□□□ -1.58
GABPAQ06546 SS18L2P2-201ENST00000583960 235 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 IPO5P1-202ENST00000600039 287 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
GABPAQ06546 AC007546.1-201ENST00000619452 559 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 AC091905.2-201ENST00000623143 306 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.16□□□□□ -1.58
GABPAQ06546 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
GABPAQ06546 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
GABPAQ06546 MFSD8-242ENST00000641690 4199 ntBASIC5.16□□□□□ -1.58
GABPAQ06546 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
GABPAQ06546 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
GABPAQ06546 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
GABPAQ06546 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
GABPAQ06546 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
GABPAQ06546 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.15□□□□□ -1.58
GABPAQ06546 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
GABPAQ06546 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
GABPAQ06546 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
GABPAQ06546 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.15□□□□□ -1.58
GABPAQ06546 AC011503.2-201ENST00000594230 1500 ntBASIC5.15□□□□□ -1.58
GABPAQ06546 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
GABPAQ06546 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.15□□□□□ -1.58
GABPAQ06546 RNA5SP307-201ENST00000362863 116 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
GABPAQ06546 AL121878.1-201ENST00000418638 859 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 EIF4A1P1-201ENST00000420241 934 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 AL157831.1-201ENST00000426134 473 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 RPS27AP12-201ENST00000429552 465 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 RPEP2-201ENST00000432149 701 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.15□□□□□ -1.59
GABPAQ06546 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.15□□□□□ -1.59
GABPAQ06546 DDX39BP2-208ENST00000453923 258 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.15□□□□□ -1.59
GABPAQ06546 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.15□□□□□ -1.59
GABPAQ06546 RNA5SP49-201ENST00000516450 115 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.15□□□□□ -1.59
GABPAQ06546 AP001804.2-201ENST00000533932 910 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
GABPAQ06546 AC007224.1-201ENST00000564410 144 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 RPL23AP97-201ENST00000568955 471 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.15□□□□□ -1.59
GABPAQ06546 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms