Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL049839.1-201ENST00000556151 657 ntBASIC4.74□□□□□ -1.65
CDH13P55290 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.74□□□□□ -1.65
CDH13P55290 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH13P55290 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH13P55290 SNORA74C-1-201ENST00000580726 201 ntBASIC4.74□□□□□ -1.65
CDH13P55290 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH13P55290 AC011447.4-201ENST00000587562 111 ntBASIC4.74□□□□□ -1.65
CDH13P55290 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH13P55290 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.74□□□□□ -1.65
CDH13P55290 AL137072.1-201ENST00000603444 466 ntBASIC4.74□□□□□ -1.65
CDH13P55290 AC005156.1-201ENST00000613371 573 ntBASIC4.74□□□□□ -1.65
CDH13P55290 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH13P55290 FRG1HP-204ENST00000617940 757 ntBASIC4.74□□□□□ -1.65
CDH13P55290 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.74□□□□□ -1.65
CDH13P55290 AC132825.7-201ENST00000638744 335 ntBASIC4.74□□□□□ -1.65
CDH13P55290 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH13P55290 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH13P55290 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH13P55290 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
CDH13P55290 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CDH13P55290 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH13P55290 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.74□□□□□ -1.65
CDH13P55290 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDH13P55290 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDH13P55290 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH13P55290 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
CDH13P55290 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CDH13P55290 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.73□□□□□ -1.65
CDH13P55290 VN2R3P-201ENST00000422626 1412 ntBASIC4.73□□□□□ -1.65
CDH13P55290 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.73□□□□□ -1.65
CDH13P55290 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH13P55290 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CDH13P55290 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CDH13P55290 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH13P55290 AC092642.1-201ENST00000392417 425 ntBASIC4.73□□□□□ -1.65
CDH13P55290 HMGB3P19-201ENST00000403971 560 ntBASIC4.73□□□□□ -1.65
CDH13P55290 U3.35-201ENST00000408405 208 ntBASIC4.73□□□□□ -1.65
CDH13P55290 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH13P55290 AL445183.3-201ENST00000414168 502 ntBASIC4.73□□□□□ -1.65
CDH13P55290 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH13P55290 RPS6P14-201ENST00000425165 719 ntBASIC4.73□□□□□ -1.65
CDH13P55290 SEC63P1-201ENST00000425785 1258 ntBASIC4.73□□□□□ -1.65
CDH13P55290 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDH13P55290 MRPL50P1-201ENST00000431951 384 ntBASIC4.73□□□□□ -1.65
CDH13P55290 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH13P55290 ELOCP10-201ENST00000440624 327 ntBASIC4.73□□□□□ -1.65
CDH13P55290 CNOT7P2-201ENST00000441051 832 ntBASIC4.73□□□□□ -1.65
CDH13P55290 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH13P55290 PPIAP20-201ENST00000449839 135 ntBASIC4.73□□□□□ -1.65
CDH13P55290 AL935212.3-201ENST00000450729 284 ntBASIC4.73□□□□□ -1.65
CDH13P55290 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.73□□□□□ -1.65
CDH13P55290 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH13P55290 RN7SL319P-201ENST00000480656 221 ntBASIC4.73□□□□□ -1.65
CDH13P55290 RN7SL30P-201ENST00000488416 306 ntBASIC4.73□□□□□ -1.65
CDH13P55290 HIGD1AP14-201ENST00000507617 282 ntBASIC4.73□□□□□ -1.65
CDH13P55290 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.73□□□□□ -1.65
CDH13P55290 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CDH13P55290 Y_RNA.719-201ENST00000517156 106 ntBASIC4.73□□□□□ -1.65
CDH13P55290 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.73□□□□□ -1.65
CDH13P55290 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH13P55290 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH13P55290 GLRXP2-201ENST00000555594 321 ntBASIC4.73□□□□□ -1.65
CDH13P55290 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH13P55290 AC027104.1-201ENST00000563702 681 ntBASIC4.73□□□□□ -1.65
CDH13P55290 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.73□□□□□ -1.65
CDH13P55290 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDH13P55290 MIR1269B-201ENST00000580405 75 ntBASIC4.73□□□□□ -1.65
CDH13P55290 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH13P55290 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CDH13P55290 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
CDH13P55290 VN1R84P-201ENST00000593697 235 ntBASIC4.73□□□□□ -1.65
CDH13P55290 ELOCP34-201ENST00000604436 327 ntBASIC4.73□□□□□ -1.65
CDH13P55290 MEMO1P5-201ENST00000604810 406 ntBASIC4.73□□□□□ -1.65
CDH13P55290 SNORD91B-202ENST00000608459 222 ntBASIC4.73□□□□□ -1.65
CDH13P55290 AC097505.1-201ENST00000610199 565 ntBASIC4.73□□□□□ -1.65
CDH13P55290 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH13P55290 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH13P55290 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.73□□□□□ -1.65
CDH13P55290 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.73□□□□□ -1.65
CDH13P55290 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
CDH13P55290 AC006042.3-201ENST00000454684 1469 ntBASIC4.73□□□□□ -1.65
CDH13P55290 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.73□□□□□ -1.65
CDH13P55290 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.73□□□□□ -1.65
CDH13P55290 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
CDH13P55290 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.73□□□□□ -1.65
CDH13P55290 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH13P55290 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CDH13P55290 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH13P55290 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.73□□□□□ -1.65
CDH13P55290 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH13P55290 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CDH13P55290 MTND4P31-201ENST00000425607 1343 ntBASIC4.72□□□□□ -1.65
CDH13P55290 AL133268.1-201ENST00000405676 1401 ntBASIC4.72□□□□□ -1.65
CDH13P55290 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
CDH13P55290 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CDH13P55290 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH13P55290 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CDH13P55290 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.72□□□□□ -1.65
CDH13P55290 RNU6-317P-201ENST00000384031 107 ntBASIC4.72□□□□□ -1.65
CDH13P55290 RNU6-98P-201ENST00000384173 107 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms