Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL139099.4-201ENST00000614802 114 ntBASIC6.72□□□□□ -1.33
USP11P51784 AL136221.1-201ENST00000621449 509 ntBASIC6.72□□□□□ -1.33
USP11P51784 AC087821.2-201ENST00000637086 450 ntBASIC6.72□□□□□ -1.33
USP11P51784 LINC01739-205ENST00000641890 573 ntBASIC6.72□□□□□ -1.33
USP11P51784 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
USP11P51784 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
USP11P51784 AC005725.1-201ENST00000577346 2607 ntBASIC6.72□□□□□ -1.33
USP11P51784 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.72□□□□□ -1.33
USP11P51784 AC073055.1-201ENST00000456901 1621 ntBASIC6.72□□□□□ -1.33
USP11P51784 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
USP11P51784 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
USP11P51784 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.33
USP11P51784 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
USP11P51784 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
USP11P51784 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.71□□□□□ -1.33
USP11P51784 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.71□□□□□ -1.34
USP11P51784 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USP11P51784 ZNF101P1-201ENST00000435701 1720 ntBASIC6.71□□□□□ -1.34
USP11P51784 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USP11P51784 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.71□□□□□ -1.34
USP11P51784 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USP11P51784 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
USP11P51784 OR9G4-201ENST00000302957 984 ntBASIC6.71□□□□□ -1.34
USP11P51784 CBX3P1-201ENST00000325243 554 ntBASIC6.71□□□□□ -1.34
USP11P51784 TMSB4XP2-201ENST00000335179 210 ntBASIC6.71□□□□□ -1.34
USP11P51784 Y_RNA.38-201ENST00000362617 102 ntBASIC6.71□□□□□ -1.34
USP11P51784 Y_RNA.535-201ENST00000384612 99 ntBASIC6.71□□□□□ -1.34
USP11P51784 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.71□□□□□ -1.34
USP11P51784 RPL10P10-201ENST00000403509 664 ntBASIC6.71□□□□□ -1.34
USP11P51784 HMGN1P20-201ENST00000411849 300 ntBASIC6.71□□□□□ -1.34
USP11P51784 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC6.71□□□□□ -1.34
USP11P51784 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USP11P51784 RPL21P32-201ENST00000419877 477 ntBASIC6.71□□□□□ -1.34
USP11P51784 AL139413.1-201ENST00000421309 217 ntBASIC6.71□□□□□ -1.34
USP11P51784 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.71□□□□□ -1.34
USP11P51784 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC6.71□□□□□ -1.34
USP11P51784 AC092427.1-201ENST00000439177 601 ntBASIC6.71□□□□□ -1.34
USP11P51784 AL663074.2-201ENST00000440621 479 ntBASIC6.71□□□□□ -1.34
USP11P51784 MTND5P14-201ENST00000441481 1267 ntBASIC6.71□□□□□ -1.34
USP11P51784 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.71□□□□□ -1.34
USP11P51784 AC098824.1-201ENST00000453565 980 ntBASIC6.71□□□□□ -1.34
USP11P51784 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.71□□□□□ -1.34
USP11P51784 AC094085.1-201ENST00000468914 584 ntBASIC6.71□□□□□ -1.34
USP11P51784 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.71□□□□□ -1.34
USP11P51784 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.71□□□□□ -1.34
USP11P51784 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.71□□□□□ -1.34
USP11P51784 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC6.71□□□□□ -1.34
USP11P51784 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.71□□□□□ -1.34
USP11P51784 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.71□□□□□ -1.34
USP11P51784 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.71□□□□□ -1.34
USP11P51784 AC068305.2-201ENST00000550567 1205 ntBASIC6.71□□□□□ -1.34
USP11P51784 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.71□□□□□ -1.34
USP11P51784 GTF2IP22-201ENST00000554443 182 ntBASIC6.71□□□□□ -1.34
USP11P51784 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC6.71□□□□□ -1.34
USP11P51784 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.71□□□□□ -1.34
USP11P51784 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.71□□□□□ -1.34
USP11P51784 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.71□□□□□ -1.34
USP11P51784 OR4K7P-201ENST00000580232 945 ntBASIC6.71□□□□□ -1.34
USP11P51784 AC006504.3-201ENST00000586818 523 ntBASIC6.71□□□□□ -1.34
USP11P51784 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.71□□□□□ -1.34
USP11P51784 AP001836.1-201ENST00000604675 523 ntBASIC6.71□□□□□ -1.34
USP11P51784 AC090578.1-201ENST00000604955 591 ntBASIC6.71□□□□□ -1.34
USP11P51784 AL354760.1-201ENST00000608357 643 ntBASIC6.71□□□□□ -1.34
USP11P51784 AP000238.1-201ENST00000608759 426 ntBASIC6.71□□□□□ -1.34
USP11P51784 AC011472.4-201ENST00000615848 491 ntBASIC6.71□□□□□ -1.34
USP11P51784 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.71□□□□□ -1.34
USP11P51784 LRRC77P-213ENST00000637727 880 ntBASIC6.71□□□□□ -1.34
USP11P51784 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
USP11P51784 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USP11P51784 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
USP11P51784 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USP11P51784 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.71□□□□□ -1.34
USP11P51784 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
USP11P51784 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
USP11P51784 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
USP11P51784 AC010329.1-201ENST00000593903 8328 ntBASIC6.71□□□□□ -1.34
USP11P51784 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.71□□□□□ -1.34
USP11P51784 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
USP11P51784 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USP11P51784 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.71□□□□□ -1.34
USP11P51784 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
USP11P51784 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USP11P51784 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USP11P51784 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.7□□□□□ -1.34
USP11P51784 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USP11P51784 CASC19-280ENST00000642102 1351 ntBASIC6.7□□□□□ -1.34
USP11P51784 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
USP11P51784 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USP11P51784 PARP4P2-201ENST00000446672 3326 ntBASIC6.7□□□□□ -1.34
USP11P51784 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.7□□□□□ -1.34
USP11P51784 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
USP11P51784 AL079343.1-201ENST00000572358 1771 ntBASIC6.7□□□□□ -1.34
USP11P51784 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
USP11P51784 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
USP11P51784 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms