Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.48□□□□□ -1.69
BRCA2P51587 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.48□□□□□ -1.69
BRCA2P51587 AC093719.1-202ENST00000392735 373 ntBASIC4.48□□□□□ -1.69
BRCA2P51587 HSPD1P21-201ENST00000436541 245 ntBASIC4.48□□□□□ -1.69
BRCA2P51587 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.48□□□□□ -1.69
BRCA2P51587 AC090686.1-201ENST00000481577 749 ntBASIC4.48□□□□□ -1.69
BRCA2P51587 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BRCA2P51587 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.48□□□□□ -1.69
BRCA2P51587 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.48□□□□□ -1.69
BRCA2P51587 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BRCA2P51587 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BRCA2P51587 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
BRCA2P51587 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BRCA2P51587 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
BRCA2P51587 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
BRCA2P51587 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BRCA2P51587 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.48□□□□□ -1.69
BRCA2P51587 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.48□□□□□ -1.69
BRCA2P51587 AC018635.1-201ENST00000468292 1030 ntBASIC4.48□□□□□ -1.69
BRCA2P51587 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.48□□□□□ -1.69
BRCA2P51587 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.48□□□□□ -1.69
BRCA2P51587 AC119674.1-212ENST00000641155 993 ntBASIC4.48□□□□□ -1.69
BRCA2P51587 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.48□□□□□ -1.69
BRCA2P51587 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
BRCA2P51587 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
BRCA2P51587 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BRCA2P51587 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
BRCA2P51587 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
BRCA2P51587 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
BRCA2P51587 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BRCA2P51587 RPS4XP12-201ENST00000461747 709 ntBASIC4.47□□□□□ -1.69
BRCA2P51587 AL137849.1-201ENST00000604767 169 ntBASIC4.47□□□□□ -1.69
BRCA2P51587 MIR8058-201ENST00000615737 89 ntBASIC4.47□□□□□ -1.69
BRCA2P51587 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.47□□□□□ -1.69
BRCA2P51587 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
BRCA2P51587 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRCA2P51587 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
BRCA2P51587 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.47□□□□□ -1.69
BRCA2P51587 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BRCA2P51587 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRCA2P51587 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
BRCA2P51587 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRCA2P51587 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.47□□□□□ -1.69
BRCA2P51587 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.47□□□□□ -1.69
BRCA2P51587 AC111000.6-201ENST00000514471 709 ntBASIC4.47□□□□□ -1.69
BRCA2P51587 AC091178.1-203ENST00000584586 279 ntBASIC4.47□□□□□ -1.69
BRCA2P51587 BNIP3P10-201ENST00000605360 577 ntBASIC4.47□□□□□ -1.69
BRCA2P51587 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BRCA2P51587 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.47□□□□□ -1.69
BRCA2P51587 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
BRCA2P51587 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC4.47□□□□□ -1.69
BRCA2P51587 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
BRCA2P51587 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
BRCA2P51587 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
BRCA2P51587 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.47□□□□□ -1.69
BRCA2P51587 AL360270.2-201ENST00000562952 5985 ntBASIC4.47□□□□□ -1.69
BRCA2P51587 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRCA2P51587 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.47□□□□□ -1.69
BRCA2P51587 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC4.47□□□□□ -1.69
BRCA2P51587 RPL23AP46-201ENST00000438548 490 ntBASIC4.47□□□□□ -1.69
BRCA2P51587 AC127537.2-201ENST00000439258 465 ntBASIC4.47□□□□□ -1.69
BRCA2P51587 MRPL35P4-201ENST00000453682 566 ntBASIC4.47□□□□□ -1.69
BRCA2P51587 BNIP3P41-201ENST00000503774 571 ntBASIC4.47□□□□□ -1.69
BRCA2P51587 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.47□□□□□ -1.69
BRCA2P51587 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.47□□□□□ -1.69
BRCA2P51587 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.47□□□□□ -1.69
BRCA2P51587 AL353726.1-201ENST00000614041 1000 ntBASIC4.47□□□□□ -1.69
BRCA2P51587 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
BRCA2P51587 AC093297.3-201ENST00000607056 2517 ntBASIC4.47□□□□□ -1.69
BRCA2P51587 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.47□□□□□ -1.69
BRCA2P51587 AC093829.1-201ENST00000506662 1618 ntBASIC4.47□□□□□ -1.69
BRCA2P51587 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRCA2P51587 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRCA2P51587 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BRCA2P51587 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
BRCA2P51587 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
BRCA2P51587 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
BRCA2P51587 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
BRCA2P51587 CYCSP4-201ENST00000429682 331 ntBASIC4.46□□□□□ -1.69
BRCA2P51587 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.46□□□□□ -1.69
BRCA2P51587 MIR3945-201ENST00000581853 98 ntBASIC4.46□□□□□ -1.69
BRCA2P51587 AC243312.2-201ENST00000623340 601 ntBASIC4.46□□□□□ -1.69
BRCA2P51587 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
BRCA2P51587 AC023632.6-201ENST00000624338 2177 ntBASIC4.46□□□□□ -1.7
BRCA2P51587 AL355488.2-201ENST00000609909 2850 ntBASIC4.46□□□□□ -1.7
BRCA2P51587 AC093671.1-201ENST00000624981 2929 ntBASIC4.46□□□□□ -1.7
BRCA2P51587 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC4.46□□□□□ -1.7
BRCA2P51587 MAPK10-253ENST00000641010 4072 ntBASIC4.46□□□□□ -1.7
BRCA2P51587 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
BRCA2P51587 TCEA1P2-201ENST00000420496 906 ntBASIC4.46□□□□□ -1.7
BRCA2P51587 RN7SL601P-201ENST00000471221 293 ntBASIC4.46□□□□□ -1.7
BRCA2P51587 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.46□□□□□ -1.7
BRCA2P51587 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.46□□□□□ -1.7
BRCA2P51587 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.46□□□□□ -1.7
BRCA2P51587 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
BRCA2P51587 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC4.46□□□□□ -1.7
BRCA2P51587 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
BRCA2P51587 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
BRCA2P51587 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BRCA2P51587 AC007738.1-201ENST00000413892 348 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms