Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.92□□□□□ -1.62
LHX1P48742 snoU13.1-201ENST00000459157 104 ntBASIC4.92□□□□□ -1.62
LHX1P48742 AC037198.2-201ENST00000478845 733 ntBASIC4.92□□□□□ -1.62
LHX1P48742 RN7SL346P-201ENST00000491561 294 ntBASIC4.92□□□□□ -1.62
LHX1P48742 AC093890.1-201ENST00000502554 540 ntBASIC4.92□□□□□ -1.62
LHX1P48742 CDH12P2-201ENST00000504393 298 ntBASIC4.92□□□□□ -1.62
LHX1P48742 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.92□□□□□ -1.62
LHX1P48742 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LHX1P48742 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.92□□□□□ -1.62
LHX1P48742 MTND1P36-201ENST00000522384 936 ntBASIC4.92□□□□□ -1.62
LHX1P48742 OR4R2P-201ENST00000530815 597 ntBASIC4.92□□□□□ -1.62
LHX1P48742 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.92□□□□□ -1.62
LHX1P48742 AC079148.1-201ENST00000565944 819 ntBASIC4.92□□□□□ -1.62
LHX1P48742 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.92□□□□□ -1.62
LHX1P48742 AP005119.2-201ENST00000579735 1105 ntBASIC4.92□□□□□ -1.62
LHX1P48742 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.92□□□□□ -1.62
LHX1P48742 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.92□□□□□ -1.62
LHX1P48742 AL133243.1-201ENST00000614487 366 ntBASIC4.92□□□□□ -1.62
LHX1P48742 MIR1264-201ENST00000616374 69 ntBASIC4.92□□□□□ -1.62
LHX1P48742 AL445493.3-201ENST00000619568 477 ntBASIC4.92□□□□□ -1.62
LHX1P48742 AL049536.1-201ENST00000625043 744 ntBASIC4.92□□□□□ -1.62
LHX1P48742 MIR7641-1-201ENST00000627518 61 ntBASIC4.92□□□□□ -1.62
LHX1P48742 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.92□□□□□ -1.62
LHX1P48742 OR56B2P-202ENST00000641377 2453 ntBASIC4.92□□□□□ -1.62
LHX1P48742 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
LHX1P48742 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX1P48742 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
LHX1P48742 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LHX1P48742 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.92□□□□□ -1.62
LHX1P48742 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX1P48742 MTCO1P15-201ENST00000529569 1526 ntBASIC4.92□□□□□ -1.62
LHX1P48742 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX1P48742 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LHX1P48742 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
LHX1P48742 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.91□□□□□ -1.62
LHX1P48742 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.91□□□□□ -1.62
LHX1P48742 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.91□□□□□ -1.62
LHX1P48742 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX1P48742 AC021146.4-201ENST00000309229 279 ntBASIC4.91□□□□□ -1.62
LHX1P48742 RNU1-32P-201ENST00000363937 159 ntBASIC4.91□□□□□ -1.62
LHX1P48742 MIR129-1-201ENST00000384972 72 ntBASIC4.91□□□□□ -1.62
LHX1P48742 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX1P48742 Y_RNA.625-201ENST00000411256 107 ntBASIC4.91□□□□□ -1.62
LHX1P48742 SETP15-201ENST00000412724 337 ntBASIC4.91□□□□□ -1.62
LHX1P48742 AL121882.1-201ENST00000422893 417 ntBASIC4.91□□□□□ -1.62
LHX1P48742 OR6K4P-201ENST00000423179 955 ntBASIC4.91□□□□□ -1.62
LHX1P48742 CENPIP1-201ENST00000425713 902 ntBASIC4.91□□□□□ -1.62
LHX1P48742 MORF4L1P7-201ENST00000426038 703 ntBASIC4.91□□□□□ -1.62
LHX1P48742 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.91□□□□□ -1.62
LHX1P48742 AC022022.1-201ENST00000430304 178 ntBASIC4.91□□□□□ -1.62
LHX1P48742 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.91□□□□□ -1.62
LHX1P48742 PTP4A1P3-201ENST00000433661 420 ntBASIC4.91□□□□□ -1.62
LHX1P48742 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LHX1P48742 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.91□□□□□ -1.62
LHX1P48742 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.91□□□□□ -1.62
LHX1P48742 AP000949.1-201ENST00000438328 629 ntBASIC4.91□□□□□ -1.62
LHX1P48742 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.91□□□□□ -1.62
LHX1P48742 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.91□□□□□ -1.62
LHX1P48742 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.91□□□□□ -1.62
LHX1P48742 ISCUP1-201ENST00000454451 448 ntBASIC4.91□□□□□ -1.62
LHX1P48742 PSMC1P13-201ENST00000458195 985 ntBASIC4.91□□□□□ -1.62
LHX1P48742 RPL5P22-201ENST00000480199 884 ntBASIC4.91□□□□□ -1.62
LHX1P48742 RN7SL459P-201ENST00000481078 302 ntBASIC4.91□□□□□ -1.62
LHX1P48742 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LHX1P48742 RPL23AP73-201ENST00000492507 471 ntBASIC4.91□□□□□ -1.62
LHX1P48742 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LHX1P48742 AC027338.1-201ENST00000514840 825 ntBASIC4.91□□□□□ -1.62
LHX1P48742 SNORA76.2-201ENST00000517095 137 ntBASIC4.91□□□□□ -1.62
LHX1P48742 AP001781.1-201ENST00000530977 207 ntBASIC4.91□□□□□ -1.62
LHX1P48742 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.91□□□□□ -1.62
LHX1P48742 AC093014.1-201ENST00000548926 724 ntBASIC4.91□□□□□ -1.62
LHX1P48742 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.91□□□□□ -1.62
LHX1P48742 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.91□□□□□ -1.62
LHX1P48742 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.91□□□□□ -1.62
LHX1P48742 AC008745.1-201ENST00000604064 271 ntBASIC4.91□□□□□ -1.62
LHX1P48742 AL158211.2-201ENST00000607282 395 ntBASIC4.91□□□□□ -1.62
LHX1P48742 AC100847.1-201ENST00000611316 481 ntBASIC4.91□□□□□ -1.62
LHX1P48742 BNIP3P41-202ENST00000616656 861 ntBASIC4.91□□□□□ -1.62
LHX1P48742 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.91□□□□□ -1.62
LHX1P48742 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.91□□□□□ -1.62
LHX1P48742 AC074140.1-201ENST00000621617 208 ntBASIC4.91□□□□□ -1.62
LHX1P48742 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.91□□□□□ -1.62
LHX1P48742 AC097372.4-201ENST00000625025 466 ntBASIC4.91□□□□□ -1.62
LHX1P48742 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.91□□□□□ -1.62
LHX1P48742 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.91□□□□□ -1.62
LHX1P48742 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX1P48742 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX1P48742 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX1P48742 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LHX1P48742 MAPK10-286ENST00000641208 8747 ntBASIC4.91□□□□□ -1.62
LHX1P48742 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.91□□□□□ -1.62
LHX1P48742 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.91□□□□□ -1.62
LHX1P48742 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX1P48742 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LHX1P48742 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LHX1P48742 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
LHX1P48742 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LHX1P48742 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.9□□□□□ -1.62
LHX1P48742 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.9□□□□□ -1.62
LHX1P48742 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms