Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RORAP35398 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
RORAP35398 IL6STP1-201ENST00000346911 1020 ntBASIC4.45□□□□□ -1.7
RORAP35398 AC006065.1-201ENST00000422539 802 ntBASIC4.45□□□□□ -1.7
RORAP35398 RGS17P1-201ENST00000423358 553 ntBASIC4.45□□□□□ -1.7
RORAP35398 ELOCP3-201ENST00000439303 348 ntBASIC4.45□□□□□ -1.7
RORAP35398 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.45□□□□□ -1.7
RORAP35398 H2AFZP5-201ENST00000446960 382 ntBASIC4.45□□□□□ -1.7
RORAP35398 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.45□□□□□ -1.7
RORAP35398 AC069277.2-201ENST00000454211 432 ntBASIC4.45□□□□□ -1.7
RORAP35398 AL445433.1-201ENST00000457507 257 ntBASIC4.45□□□□□ -1.7
RORAP35398 RPL5P30-201ENST00000465511 891 ntBASIC4.45□□□□□ -1.7
RORAP35398 RPL36AP41-201ENST00000493820 306 ntBASIC4.45□□□□□ -1.7
RORAP35398 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RORAP35398 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.45□□□□□ -1.7
RORAP35398 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.45□□□□□ -1.7
RORAP35398 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RORAP35398 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RORAP35398 AC018552.3-201ENST00000567416 561 ntBASIC4.45□□□□□ -1.7
RORAP35398 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.45□□□□□ -1.7
RORAP35398 AC011815.3-201ENST00000624194 473 ntBASIC4.45□□□□□ -1.7
RORAP35398 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RORAP35398 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
RORAP35398 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RORAP35398 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RORAP35398 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RORAP35398 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.45□□□□□ -1.7
RORAP35398 CASC19-206ENST00000641028 1430 ntBASIC4.45□□□□□ -1.7
RORAP35398 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.45□□□□□ -1.7
RORAP35398 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
RORAP35398 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RORAP35398 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RORAP35398 AC010329.2-201ENST00000595195 2737 ntBASIC4.44□□□□□ -1.7
RORAP35398 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
RORAP35398 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.44□□□□□ -1.7
RORAP35398 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RORAP35398 AC092435.4-201ENST00000623012 4159 ntBASIC4.44□□□□□ -1.7
RORAP35398 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RORAP35398 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RORAP35398 AL136164.3-201ENST00000624429 3978 ntBASIC4.44□□□□□ -1.7
RORAP35398 AC092079.1-201ENST00000558620 1985 ntBASIC4.44□□□□□ -1.7
RORAP35398 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.44□□□□□ -1.7
RORAP35398 AC110792.3-201ENST00000595906 1614 ntBASIC4.44□□□□□ -1.7
RORAP35398 OR10J6P-201ENST00000289731 930 ntBASIC4.44□□□□□ -1.7
RORAP35398 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RORAP35398 RNA5SP28-201ENST00000363841 119 ntBASIC4.44□□□□□ -1.7
RORAP35398 ARL4AP5-201ENST00000404372 599 ntBASIC4.44□□□□□ -1.7
RORAP35398 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RORAP35398 ELOCP19-201ENST00000411919 318 ntBASIC4.44□□□□□ -1.7
RORAP35398 EIF4HP2-201ENST00000424380 563 ntBASIC4.44□□□□□ -1.7
RORAP35398 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.44□□□□□ -1.7
RORAP35398 C4BPAP2-201ENST00000428434 478 ntBASIC4.44□□□□□ -1.7
RORAP35398 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.44□□□□□ -1.7
RORAP35398 AC004938.1-201ENST00000438468 308 ntBASIC4.44□□□□□ -1.7
RORAP35398 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.44□□□□□ -1.7
RORAP35398 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.44□□□□□ -1.7
RORAP35398 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.44□□□□□ -1.7
RORAP35398 TXNP2-201ENST00000443918 295 ntBASIC4.44□□□□□ -1.7
RORAP35398 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.44□□□□□ -1.7
RORAP35398 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.44□□□□□ -1.7
RORAP35398 MRPL48P1-201ENST00000445390 636 ntBASIC4.44□□□□□ -1.7
RORAP35398 GEMIN8P3-201ENST00000445417 720 ntBASIC4.44□□□□□ -1.7
RORAP35398 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.44□□□□□ -1.7
RORAP35398 ARL2BPP10-201ENST00000446487 531 ntBASIC4.44□□□□□ -1.7
RORAP35398 AC025164.1-201ENST00000496249 478 ntBASIC4.44□□□□□ -1.7
RORAP35398 HPRT1P1-201ENST00000509498 657 ntBASIC4.44□□□□□ -1.7
RORAP35398 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.44□□□□□ -1.7
RORAP35398 AC090819.1-201ENST00000523800 1111 ntBASIC4.44□□□□□ -1.7
RORAP35398 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.44□□□□□ -1.7
RORAP35398 AC090515.3-201ENST00000560431 315 ntBASIC4.44□□□□□ -1.7
RORAP35398 RPL12P25-202ENST00000598100 674 ntBASIC4.44□□□□□ -1.7
RORAP35398 SNX6P1-201ENST00000601728 1224 ntBASIC4.44□□□□□ -1.7
RORAP35398 RNF138P2-201ENST00000603490 592 ntBASIC4.44□□□□□ -1.7
RORAP35398 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.44□□□□□ -1.7
RORAP35398 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.44□□□□□ -1.7
RORAP35398 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.44□□□□□ -1.7
RORAP35398 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.44□□□□□ -1.7
RORAP35398 AC004232.3-201ENST00000622977 525 ntBASIC4.44□□□□□ -1.7
RORAP35398 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RORAP35398 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.44□□□□□ -1.7
RORAP35398 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
RORAP35398 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.44□□□□□ -1.7
RORAP35398 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RORAP35398 OR56B2P-202ENST00000641377 2453 ntBASIC4.44□□□□□ -1.7
RORAP35398 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RORAP35398 AC114546.3-201ENST00000623582 1734 ntBASIC4.43□□□□□ -1.7
RORAP35398 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
RORAP35398 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RORAP35398 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RORAP35398 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
RORAP35398 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RORAP35398 AL137100.1-201ENST00000556703 1620 ntBASIC4.43□□□□□ -1.7
RORAP35398 ZNF137P-201ENST00000456718 1920 ntBASIC4.43□□□□□ -1.7
RORAP35398 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.43□□□□□ -1.7
RORAP35398 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RORAP35398 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RORAP35398 AC008549.2-201ENST00000333482 706 ntBASIC4.43□□□□□ -1.7
RORAP35398 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
RORAP35398 SNORA62-201ENST00000365493 153 ntBASIC4.43□□□□□ -1.7
RORAP35398 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms