Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 MRPL35P2-201ENST00000448009 511 ntBASIC5.22□□□□□ -1.57
HOXA11P31270 AL157884.3-201ENST00000448273 1184 ntBASIC5.22□□□□□ -1.57
HOXA11P31270 AL356981.1-201ENST00000454879 684 ntBASIC5.22□□□□□ -1.57
HOXA11P31270 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA11P31270 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA11P31270 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA11P31270 BOLA3P3-201ENST00000505182 232 ntBASIC5.22□□□□□ -1.57
HOXA11P31270 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXA11P31270 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA11P31270 IGHV3-63-201ENST00000518422 341 ntBASIC5.22□□□□□ -1.57
HOXA11P31270 AP003355.1-201ENST00000518956 587 ntBASIC5.22□□□□□ -1.57
HOXA11P31270 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA11P31270 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXA11P31270 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA11P31270 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA11P31270 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.22□□□□□ -1.57
HOXA11P31270 AC105129.1-201ENST00000560250 297 ntBASIC5.22□□□□□ -1.57
HOXA11P31270 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA11P31270 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXA11P31270 AC010435.1-201ENST00000623353 1177 ntBASIC5.22□□□□□ -1.57
HOXA11P31270 AP003476.1-201ENST00000623984 516 ntBASIC5.22□□□□□ -1.57
HOXA11P31270 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA11P31270 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA11P31270 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXA11P31270 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA11P31270 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA11P31270 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA11P31270 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXA11P31270 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXA11P31270 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXA11P31270 AC007382.1-201ENST00000624376 2618 ntBASIC5.22□□□□□ -1.57
HOXA11P31270 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXA11P31270 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
HOXA11P31270 AL132640.2-201ENST00000559968 1698 ntBASIC5.21□□□□□ -1.57
HOXA11P31270 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA11P31270 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HOXA11P31270 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA11P31270 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA11P31270 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA11P31270 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA11P31270 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA11P31270 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HOXA11P31270 MT-TP-201ENST00000387461 68 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 RNA5SP332-201ENST00000391063 115 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA11P31270 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA11P31270 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA11P31270 AC009506.2-201ENST00000420635 840 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXA11P31270 MTCO2P23-201ENST00000425216 680 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXA11P31270 AC092162.1-201ENST00000432828 434 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXA11P31270 AL513321.1-201ENST00000441175 761 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA11P31270 MTND1P31-201ENST00000449206 961 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA11P31270 CALM1P2-201ENST00000452941 448 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXA11P31270 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXA11P31270 RN7SL860P-201ENST00000473738 223 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 NPM1P17-201ENST00000479221 602 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXA11P31270 AC093720.1-201ENST00000505681 714 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXA11P31270 RNU6-334P-201ENST00000517072 102 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA11P31270 AC105031.1-201ENST00000518550 476 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA11P31270 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.21□□□□□ -1.58
HOXA11P31270 AC005868.1-201ENST00000536421 331 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.21□□□□□ -1.58
HOXA11P31270 AC006349.1-201ENST00000555526 235 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 MIMT1-201ENST00000597105 1050 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 BMS1P7-201ENST00000602440 1052 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 AC084782.3-201ENST00000612282 578 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 AC008759.3-201ENST00000613300 508 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 MIR6810-201ENST00000622701 70 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 AC145207.9-201ENST00000623802 325 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 MTND2P41-201ENST00000637599 773 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HOXA11P31270 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA11P31270 DHX40P1-201ENST00000588725 1412 ntBASIC5.21□□□□□ -1.58
HOXA11P31270 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.21□□□□□ -1.58
HOXA11P31270 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HOXA11P31270 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.21□□□□□ -1.58
HOXA11P31270 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HOXA11P31270 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
HOXA11P31270 BX005019.1-201ENST00000561881 1810 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA11P31270 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA11P31270 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
HOXA11P31270 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA11P31270 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.2□□□□□ -1.58
HOXA11P31270 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA11P31270 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA11P31270 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HOXA11P31270 RNU6-650P-201ENST00000365658 111 ntBASIC5.2□□□□□ -1.58
HOXA11P31270 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms