Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 COX6CP4-201ENST00000605798 228 ntBASIC5.01□□□□□ -1.61
COL4A5P29400 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A5P29400 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
COL4A5P29400 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
COL4A5P29400 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A5P29400 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
COL4A5P29400 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A5P29400 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL4A5P29400 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
COL4A5P29400 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5□□□□□ -1.61
COL4A5P29400 AC068870.3-201ENST00000625077 2536 ntBASIC5□□□□□ -1.61
COL4A5P29400 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
COL4A5P29400 MIR7-3-201ENST00000384898 110 ntBASIC5□□□□□ -1.61
COL4A5P29400 ATP5F1P4-201ENST00000397288 746 ntBASIC5□□□□□ -1.61
COL4A5P29400 RPL7P58-201ENST00000402913 758 ntBASIC5□□□□□ -1.61
COL4A5P29400 NPM1P34-201ENST00000428821 893 ntBASIC5□□□□□ -1.61
COL4A5P29400 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5□□□□□ -1.61
COL4A5P29400 RPS26P4-201ENST00000431743 355 ntBASIC5□□□□□ -1.61
COL4A5P29400 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC5□□□□□ -1.61
COL4A5P29400 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5□□□□□ -1.61
COL4A5P29400 RPS4XP18-201ENST00000495480 763 ntBASIC5□□□□□ -1.61
COL4A5P29400 AC006499.5-201ENST00000505037 514 ntBASIC5□□□□□ -1.61
COL4A5P29400 RNA5SP116-201ENST00000516132 98 ntBASIC5□□□□□ -1.61
COL4A5P29400 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5□□□□□ -1.61
COL4A5P29400 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL4A5P29400 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5□□□□□ -1.61
COL4A5P29400 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5□□□□□ -1.61
COL4A5P29400 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL4A5P29400 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5□□□□□ -1.61
COL4A5P29400 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL4A5P29400 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC5□□□□□ -1.61
COL4A5P29400 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5□□□□□ -1.61
COL4A5P29400 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
COL4A5P29400 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL4A5P29400 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
COL4A5P29400 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5□□□□□ -1.61
COL4A5P29400 MAPK10-349ENST00000641767 3661 ntBASIC5□□□□□ -1.61
COL4A5P29400 AL672167.1-204ENST00000641875 3017 ntBASIC5□□□□□ -1.61
COL4A5P29400 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL4A5P29400 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
COL4A5P29400 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5□□□□□ -1.61
COL4A5P29400 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A5P29400 MIR483-201ENST00000385070 76 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A5P29400 SNORA59A-201ENST00000459326 152 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 AC069304.1-201ENST00000491593 704 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A5P29400 AC108145.1-201ENST00000503770 153 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A5P29400 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.99□□□□□ -1.61
COL4A5P29400 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A5P29400 MIR6868-201ENST00000611215 58 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A5P29400 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A5P29400 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A5P29400 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A5P29400 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.99□□□□□ -1.61
COL4A5P29400 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
COL4A5P29400 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A5P29400 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A5P29400 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A5P29400 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A5P29400 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL4A5P29400 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
COL4A5P29400 MIR183-201ENST00000384958 110 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 SNORD66.1-201ENST00000391230 76 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A5P29400 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.99□□□□□ -1.61
COL4A5P29400 AP000907.1-201ENST00000428428 510 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 HMGN2P31-201ENST00000432430 273 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A5P29400 VN1R32P-201ENST00000452234 905 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.99□□□□□ -1.61
COL4A5P29400 RPL38P1-201ENST00000460914 211 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 RN7SKP141-201ENST00000516167 338 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 SCARNA14-201ENST00000516903 136 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 RNA5SP230-201ENST00000517039 122 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.99□□□□□ -1.61
COL4A5P29400 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A5P29400 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A5P29400 AC096553.1-201ENST00000605169 829 ntBASIC4.99□□□□□ -1.61
COL4A5P29400 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.99□□□□□ -1.61
COL4A5P29400 AC007529.1-201ENST00000418574 2178 ntBASIC4.98□□□□□ -1.61
COL4A5P29400 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A5P29400 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A5P29400 VPS35P1-201ENST00000563400 1518 ntBASIC4.98□□□□□ -1.61
COL4A5P29400 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
COL4A5P29400 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A5P29400 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A5P29400 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
COL4A5P29400 DMD-211ENST00000378707 7410 ntTSL 5 BASIC4.98□□□□□ -1.61
COL4A5P29400 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL4A5P29400 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
COL4A5P29400 AC007967.1-201ENST00000455422 1159 ntBASIC4.98□□□□□ -1.61
COL4A5P29400 OR9M1P-201ENST00000459641 921 ntBASIC4.98□□□□□ -1.61
COL4A5P29400 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.98□□□□□ -1.61
COL4A5P29400 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.98□□□□□ -1.61
COL4A5P29400 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.98□□□□□ -1.61
COL4A5P29400 PAICSP4-201ENST00000517543 1253 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms