Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC118282.1-201ENST00000506408 765 ntBASIC4.29□□□□□ -1.72
SHC1P29353 AC117525.1-201ENST00000515228 503 ntBASIC4.29□□□□□ -1.72
SHC1P29353 AC112198.4-201ENST00000515450 351 ntBASIC4.29□□□□□ -1.72
SHC1P29353 RNU6-1102P-201ENST00000516149 96 ntBASIC4.29□□□□□ -1.72
SHC1P29353 RNU2-30P-201ENST00000516209 141 ntBASIC4.29□□□□□ -1.72
SHC1P29353 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.29□□□□□ -1.72
SHC1P29353 AC113192.3-201ENST00000529152 742 ntBASIC4.29□□□□□ -1.72
SHC1P29353 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.29□□□□□ -1.72
SHC1P29353 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.29□□□□□ -1.72
SHC1P29353 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.29□□□□□ -1.72
SHC1P29353 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.29□□□□□ -1.72
SHC1P29353 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.29□□□□□ -1.72
SHC1P29353 AC104072.1-201ENST00000568817 668 ntBASIC4.29□□□□□ -1.72
SHC1P29353 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.29□□□□□ -1.72
SHC1P29353 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.29□□□□□ -1.72
SHC1P29353 AC091042.1-201ENST00000579213 173 ntBASIC4.29□□□□□ -1.72
SHC1P29353 RN7SL52P-201ENST00000584271 284 ntBASIC4.29□□□□□ -1.72
SHC1P29353 BNIP3P32-201ENST00000600015 554 ntBASIC4.29□□□□□ -1.72
SHC1P29353 AC133794.1-201ENST00000602731 914 ntBASIC4.29□□□□□ -1.72
SHC1P29353 AL391358.1-201ENST00000605342 190 ntBASIC4.29□□□□□ -1.72
SHC1P29353 AC097504.2-201ENST00000608088 454 ntBASIC4.29□□□□□ -1.72
SHC1P29353 AF129408.1-201ENST00000608767 431 ntBASIC4.29□□□□□ -1.72
SHC1P29353 CR589904.2-201ENST00000612533 440 ntBASIC4.29□□□□□ -1.72
SHC1P29353 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHC1P29353 AL163051.2-201ENST00000618976 735 ntBASIC4.29□□□□□ -1.72
SHC1P29353 AC109809.1-201ENST00000619665 545 ntBASIC4.29□□□□□ -1.72
SHC1P29353 AC091046.2-201ENST00000620775 665 ntBASIC4.29□□□□□ -1.72
SHC1P29353 AC006840.1-201ENST00000623069 542 ntBASIC4.29□□□□□ -1.72
SHC1P29353 AC010608.3-201ENST00000625048 527 ntBASIC4.29□□□□□ -1.72
SHC1P29353 AP003485.1-201ENST00000625093 753 ntBASIC4.29□□□□□ -1.72
SHC1P29353 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.29□□□□□ -1.72
SHC1P29353 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.29□□□□□ -1.72
SHC1P29353 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.29□□□□□ -1.72
SHC1P29353 AC120338.1-201ENST00000625074 1541 ntBASIC4.29□□□□□ -1.72
SHC1P29353 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.29□□□□□ -1.72
SHC1P29353 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.29□□□□□ -1.72
SHC1P29353 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHC1P29353 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHC1P29353 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHC1P29353 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHC1P29353 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHC1P29353 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.29□□□□□ -1.72
SHC1P29353 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHC1P29353 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHC1P29353 TTC39DP-201ENST00000416781 1688 ntBASIC4.29□□□□□ -1.72
SHC1P29353 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHC1P29353 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SHC1P29353 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHC1P29353 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHC1P29353 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.28□□□□□ -1.72
SHC1P29353 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SHC1P29353 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHC1P29353 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.28□□□□□ -1.72
SHC1P29353 OR4K17-201ENST00000315543 1032 ntBASIC4.28□□□□□ -1.72
SHC1P29353 AL590240.1-201ENST00000334118 313 ntBASIC4.28□□□□□ -1.72
SHC1P29353 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SHC1P29353 RNU6-40P-201ENST00000384254 107 ntBASIC4.28□□□□□ -1.72
SHC1P29353 MIR937-201ENST00000401271 86 ntBASIC4.28□□□□□ -1.72
SHC1P29353 OR51B3P-201ENST00000412287 913 ntBASIC4.28□□□□□ -1.72
SHC1P29353 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.28□□□□□ -1.72
SHC1P29353 CYCSP10-201ENST00000417973 294 ntBASIC4.28□□□□□ -1.72
SHC1P29353 MTCO2P17-201ENST00000424336 677 ntBASIC4.28□□□□□ -1.72
SHC1P29353 MTATP6P17-201ENST00000431030 672 ntBASIC4.28□□□□□ -1.72
SHC1P29353 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.28□□□□□ -1.72
SHC1P29353 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHC1P29353 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.28□□□□□ -1.72
SHC1P29353 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.28□□□□□ -1.72
SHC1P29353 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.28□□□□□ -1.72
SHC1P29353 AC073648.4-201ENST00000442655 781 ntBASIC4.28□□□□□ -1.72
SHC1P29353 HMGN1P5-201ENST00000448591 263 ntBASIC4.28□□□□□ -1.72
SHC1P29353 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.28□□□□□ -1.72
SHC1P29353 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.28□□□□□ -1.72
SHC1P29353 AC079168.2-201ENST00000453977 416 ntBASIC4.28□□□□□ -1.72
SHC1P29353 MTATP6P14-201ENST00000455189 673 ntBASIC4.28□□□□□ -1.72
SHC1P29353 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
SHC1P29353 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.28□□□□□ -1.72
SHC1P29353 RNA5SP360-201ENST00000516555 118 ntBASIC4.28□□□□□ -1.72
SHC1P29353 SOX5P1-201ENST00000524155 1127 ntBASIC4.28□□□□□ -1.72
SHC1P29353 AP001372.4-201ENST00000524889 472 ntBASIC4.28□□□□□ -1.72
SHC1P29353 OR7E10P-201ENST00000526420 991 ntBASIC4.28□□□□□ -1.72
SHC1P29353 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.28□□□□□ -1.72
SHC1P29353 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.28□□□□□ -1.72
SHC1P29353 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHC1P29353 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.28□□□□□ -1.72
SHC1P29353 AC079148.1-201ENST00000565944 819 ntBASIC4.28□□□□□ -1.72
SHC1P29353 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.28□□□□□ -1.72
SHC1P29353 AC233280.2-201ENST00000603917 1070 ntBASIC4.28□□□□□ -1.72
SHC1P29353 COX6CP4-201ENST00000605798 228 ntBASIC4.28□□□□□ -1.72
SHC1P29353 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.28□□□□□ -1.72
SHC1P29353 AC090912.3-201ENST00000609775 533 ntBASIC4.28□□□□□ -1.72
SHC1P29353 MIR6853-201ENST00000619642 74 ntBASIC4.28□□□□□ -1.72
SHC1P29353 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHC1P29353 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
SHC1P29353 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHC1P29353 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHC1P29353 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.28□□□□□ -1.72
SHC1P29353 SDAD1P1-202ENST00000524156 2051 ntBASIC4.28□□□□□ -1.72
SHC1P29353 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.28□□□□□ -1.72
SHC1P29353 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHC1P29353 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms