Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC022146.1-201ENST00000595307 847 ntBASIC7.22□□□□□ -1.25
RXRBP28702 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.22□□□□□ -1.25
RXRBP28702 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC7.22□□□□□ -1.25
RXRBP28702 AC009237.15-201ENST00000610252 501 ntBASIC7.22□□□□□ -1.25
RXRBP28702 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RXRBP28702 AC004223.4-201ENST00000612426 332 ntBASIC7.22□□□□□ -1.25
RXRBP28702 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC7.22□□□□□ -1.25
RXRBP28702 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
RXRBP28702 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RXRBP28702 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RXRBP28702 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RXRBP28702 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RXRBP28702 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.22□□□□□ -1.25
RXRBP28702 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RXRBP28702 AL603750.1-201ENST00000624216 1717 ntBASIC7.21□□□□□ -1.25
RXRBP28702 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.21□□□□□ -1.25
RXRBP28702 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
RXRBP28702 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC7.21□□□□□ -1.25
RXRBP28702 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
RXRBP28702 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.21□□□□□ -1.26
RXRBP28702 UBE2Q2P1-202ENST00000354771 883 ntBASIC7.21□□□□□ -1.26
RXRBP28702 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
RXRBP28702 SNORA37-201ENST00000384504 129 ntBASIC7.21□□□□□ -1.26
RXRBP28702 U3.28-201ENST00000391249 210 ntBASIC7.21□□□□□ -1.26
RXRBP28702 MTCO1P56-201ENST00000401674 224 ntBASIC7.21□□□□□ -1.26
RXRBP28702 AL591848.1-201ENST00000413092 322 ntBASIC7.21□□□□□ -1.26
RXRBP28702 AC098592.1-201ENST00000419352 333 ntBASIC7.21□□□□□ -1.26
RXRBP28702 AL606490.7-201ENST00000433136 191 ntBASIC7.21□□□□□ -1.26
RXRBP28702 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC7.21□□□□□ -1.26
RXRBP28702 AL022237.1-201ENST00000446663 358 ntBASIC7.21□□□□□ -1.26
RXRBP28702 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RXRBP28702 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC7.21□□□□□ -1.26
RXRBP28702 RPL31P20-201ENST00000449593 360 ntBASIC7.21□□□□□ -1.26
RXRBP28702 FGF7P6-202ENST00000451282 293 ntBASIC7.21□□□□□ -1.26
RXRBP28702 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC7.21□□□□□ -1.26
RXRBP28702 AC006967.1-201ENST00000467608 589 ntBASIC7.21□□□□□ -1.26
RXRBP28702 AC126182.1-201ENST00000478134 357 ntBASIC7.21□□□□□ -1.26
RXRBP28702 AC020890.1-201ENST00000491837 504 ntBASIC7.21□□□□□ -1.26
RXRBP28702 DUTP1-201ENST00000493631 470 ntBASIC7.21□□□□□ -1.26
RXRBP28702 AC090058.1-201ENST00000498788 435 ntBASIC7.21□□□□□ -1.26
RXRBP28702 ARL4AP1-201ENST00000503220 705 ntBASIC7.21□□□□□ -1.26
RXRBP28702 AC138853.1-201ENST00000503549 823 ntBASIC7.21□□□□□ -1.26
RXRBP28702 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC7.21□□□□□ -1.26
RXRBP28702 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC7.21□□□□□ -1.26
RXRBP28702 AC112198.1-201ENST00000505369 1220 ntBASIC7.21□□□□□ -1.26
RXRBP28702 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.21□□□□□ -1.26
RXRBP28702 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RXRBP28702 RNA5SP116-201ENST00000516132 98 ntBASIC7.21□□□□□ -1.26
RXRBP28702 DUXAP2-201ENST00000519198 589 ntBASIC7.21□□□□□ -1.26
RXRBP28702 AC104417.1-201ENST00000523974 751 ntBASIC7.21□□□□□ -1.26
RXRBP28702 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC7.21□□□□□ -1.26
RXRBP28702 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RXRBP28702 AC245505.1-201ENST00000556398 224 ntBASIC7.21□□□□□ -1.26
RXRBP28702 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.21□□□□□ -1.26
RXRBP28702 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.21□□□□□ -1.26
RXRBP28702 AC092325.1-201ENST00000566449 554 ntBASIC7.21□□□□□ -1.26
RXRBP28702 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
RXRBP28702 AC007684.1-201ENST00000609671 477 ntBASIC7.21□□□□□ -1.26
RXRBP28702 MLECP1-201ENST00000615893 709 ntBASIC7.21□□□□□ -1.26
RXRBP28702 AC138932.5-201ENST00000617759 563 ntBASIC7.21□□□□□ -1.26
RXRBP28702 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC7.21□□□□□ -1.26
RXRBP28702 AC067931.1-201ENST00000624190 671 ntBASIC7.21□□□□□ -1.26
RXRBP28702 MTND5P11-201ENST00000511037 1812 ntBASIC7.21□□□□□ -1.26
RXRBP28702 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RXRBP28702 SPATA31C1-201ENST00000420021 3895 ntBASIC7.21□□□□□ -1.26
RXRBP28702 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
RXRBP28702 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RXRBP28702 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC7.21□□□□□ -1.26
RXRBP28702 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RXRBP28702 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RXRBP28702 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC7.21□□□□□ -1.26
RXRBP28702 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RXRBP28702 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RXRBP28702 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RXRBP28702 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RXRBP28702 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RXRBP28702 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RXRBP28702 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
RXRBP28702 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.2□□□□□ -1.26
RXRBP28702 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RXRBP28702 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC7.2□□□□□ -1.26
RXRBP28702 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
RXRBP28702 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.2□□□□□ -1.26
RXRBP28702 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RXRBP28702 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RXRBP28702 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RXRBP28702 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RXRBP28702 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RXRBP28702 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.2□□□□□ -1.26
RXRBP28702 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.2□□□□□ -1.26
RXRBP28702 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
RXRBP28702 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
RXRBP28702 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
RXRBP28702 AL031577.2-201ENST00000404133 280 ntBASIC7.2□□□□□ -1.26
RXRBP28702 MIR548F1-201ENST00000408667 84 ntBASIC7.2□□□□□ -1.26
RXRBP28702 RNU4-64P-201ENST00000410795 131 ntBASIC7.2□□□□□ -1.26
RXRBP28702 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC7.2□□□□□ -1.26
RXRBP28702 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.2□□□□□ -1.26
RXRBP28702 MTND1P2-201ENST00000430604 821 ntBASIC7.2□□□□□ -1.26
RXRBP28702 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms