Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AC004938.1-201ENST00000438468 308 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AC073648.4-201ENST00000442655 781 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AL031584.1-201ENST00000447169 754 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 RPL7P16-201ENST00000479738 738 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AC083982.1-201ENST00000485679 344 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 HAUS1P3-201ENST00000523909 662 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 BRD9P1-201ENST00000529855 560 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AC133555.2-201ENST00000550213 292 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AC027176.2-201ENST00000559166 746 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 MIR5699-201ENST00000578903 90 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 CBX3P2-202ENST00000583365 535 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AL355802.4-201ENST00000607635 548 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 FAM27B-201ENST00000610601 213 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 MIR8069-1-201ENST00000616627 86 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AC087385.3-201ENST00000620477 187 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 MIR8069-2-201ENST00000621412 86 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AP006248.2-201ENST00000623309 592 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AC011815.3-201ENST00000624194 473 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 AP003072.4-201ENST00000624580 310 ntBASIC4.83□□□□□ -1.64
HLA-DPA1P20036 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DPA1P20036 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 IRF5P1-201ENST00000504852 2164 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AL353743.4-201ENST00000422653 1547 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC006042.3-201ENST00000454684 1469 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AL731566.1-201ENST00000620490 1937 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 RN7SKP149-201ENST00000363008 344 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 RN7SKP103-201ENST00000363848 320 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 OR1F12-201ENST00000402365 945 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 RPL36AP10-201ENST00000421785 322 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AL645608.4-201ENST00000423619 154 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC104837.2-201ENST00000427236 424 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 RPL31P44-201ENST00000447680 377 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 RPS3AP53-201ENST00000454716 778 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC104971.1-201ENST00000495117 578 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC010285.3-201ENST00000511668 676 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 VTA1P2-201ENST00000520205 911 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC090819.1-201ENST00000523800 1111 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AP002812.4-201ENST00000532139 286 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC087477.6-201ENST00000559595 843 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC009117.1-201ENST00000563948 554 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC093249.4-201ENST00000564755 259 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC073137.1-201ENST00000605636 634 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC015849.2-201ENST00000605738 409 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC004948.1-201ENST00000609858 672 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC000123.2-201ENST00000623124 461 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AP001784.1-201ENST00000624107 428 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 SCN1A-220ENST00000641603 12506 ntBASIC4.82□□□□□ -1.64
HLA-DPA1P20036 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DPA1P20036 AC074029.4-201ENST00000624796 1859 ntBASIC4.81□□□□□ -1.64
HLA-DPA1P20036 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DPA1P20036 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms