Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.06□□□□□ -1.76
CCL4P13236 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
CCL4P13236 ATP5F1P3-201ENST00000397213 657 ntBASIC4.06□□□□□ -1.76
CCL4P13236 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.06□□□□□ -1.76
CCL4P13236 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.06□□□□□ -1.76
CCL4P13236 RPL6P21-201ENST00000418672 846 ntBASIC4.06□□□□□ -1.76
CCL4P13236 AL356276.2-201ENST00000435919 558 ntBASIC4.06□□□□□ -1.76
CCL4P13236 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.06□□□□□ -1.76
CCL4P13236 VN1R32P-201ENST00000452234 905 ntBASIC4.06□□□□□ -1.76
CCL4P13236 AC090602.1-201ENST00000469695 252 ntBASIC4.06□□□□□ -1.76
CCL4P13236 PPM1AP1-201ENST00000502740 1135 ntBASIC4.06□□□□□ -1.76
CCL4P13236 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.06□□□□□ -1.76
CCL4P13236 RNA5SP73-201ENST00000516744 108 ntBASIC4.06□□□□□ -1.76
CCL4P13236 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.06□□□□□ -1.76
CCL4P13236 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCL4P13236 AL352979.3-201ENST00000553515 247 ntBASIC4.06□□□□□ -1.76
CCL4P13236 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.06□□□□□ -1.76
CCL4P13236 MIR4286-201ENST00000580651 93 ntBASIC4.06□□□□□ -1.76
CCL4P13236 HMGB2P1-201ENST00000591146 634 ntBASIC4.06□□□□□ -1.76
CCL4P13236 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.06□□□□□ -1.76
CCL4P13236 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.06□□□□□ -1.76
CCL4P13236 AC007546.2-201ENST00000623996 360 ntBASIC4.06□□□□□ -1.76
CCL4P13236 AC010608.2-201ENST00000624830 470 ntBASIC4.06□□□□□ -1.76
CCL4P13236 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.06□□□□□ -1.76
CCL4P13236 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.06□□□□□ -1.76
CCL4P13236 AC073869.7-201ENST00000640874 297 ntBASIC4.06□□□□□ -1.76
CCL4P13236 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCL4P13236 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCL4P13236 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CCL4P13236 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.06□□□□□ -1.76
CCL4P13236 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCL4P13236 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCL4P13236 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCL4P13236 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.06□□□□□ -1.76
CCL4P13236 AC017104.4-201ENST00000636283 1592 ntBASIC4.06□□□□□ -1.76
CCL4P13236 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCL4P13236 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CCL4P13236 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CCL4P13236 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.06□□□□□ -1.76
CCL4P13236 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCL4P13236 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.05□□□□□ -1.76
CCL4P13236 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCL4P13236 RNA5SP307-201ENST00000362863 116 ntBASIC4.05□□□□□ -1.76
CCL4P13236 RNU1-20P-201ENST00000363314 162 ntBASIC4.05□□□□□ -1.76
CCL4P13236 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.05□□□□□ -1.76
CCL4P13236 AL445213.1-201ENST00000412589 747 ntBASIC4.05□□□□□ -1.76
CCL4P13236 AL356968.2-201ENST00000412769 1257 ntBASIC4.05□□□□□ -1.76
CCL4P13236 AC108032.1-201ENST00000416706 207 ntBASIC4.05□□□□□ -1.76
CCL4P13236 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.05□□□□□ -1.76
CCL4P13236 CEACAMP1-201ENST00000434624 1035 ntBASIC4.05□□□□□ -1.76
CCL4P13236 RPL23AP81-201ENST00000455252 467 ntBASIC4.05□□□□□ -1.76
CCL4P13236 RPL23AP37-201ENST00000479658 549 ntBASIC4.05□□□□□ -1.76
CCL4P13236 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.05□□□□□ -1.76
CCL4P13236 SNORA67.7-201ENST00000516664 135 ntBASIC4.05□□□□□ -1.76
CCL4P13236 RNU1-45P-201ENST00000517191 141 ntBASIC4.05□□□□□ -1.76
CCL4P13236 AC010487.1-201ENST00000594408 1172 ntBASIC4.05□□□□□ -1.76
CCL4P13236 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.05□□□□□ -1.76
CCL4P13236 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCL4P13236 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCL4P13236 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.05□□□□□ -1.76
CCL4P13236 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.05□□□□□ -1.76
CCL4P13236 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCL4P13236 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CCL4P13236 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CCL4P13236 AL449283.1-201ENST00000602631 3403 ntBASIC4.05□□□□□ -1.76
CCL4P13236 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCL4P13236 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CCL4P13236 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCL4P13236 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.04□□□□□ -1.76
CCL4P13236 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCL4P13236 CYP1D1P-201ENST00000416662 1433 ntBASIC4.04□□□□□ -1.76
CCL4P13236 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCL4P13236 AL022393.1-201ENST00000625142 1677 ntBASIC4.04□□□□□ -1.76
CCL4P13236 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.04□□□□□ -1.76
CCL4P13236 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCL4P13236 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CCL4P13236 MIR554-201ENST00000384874 96 ntBASIC4.04□□□□□ -1.76
CCL4P13236 RNU11-4P-201ENST00000391149 133 ntBASIC4.04□□□□□ -1.76
CCL4P13236 MIR921-201ENST00000401133 56 ntBASIC4.04□□□□□ -1.76
CCL4P13236 EIF1P3-201ENST00000423841 334 ntBASIC4.04□□□□□ -1.76
CCL4P13236 FTLP19-201ENST00000433300 394 ntBASIC4.04□□□□□ -1.76
CCL4P13236 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.04□□□□□ -1.76
CCL4P13236 RPS29P7-201ENST00000439662 171 ntBASIC4.04□□□□□ -1.76
CCL4P13236 RPS26P2-201ENST00000440331 348 ntBASIC4.04□□□□□ -1.76
CCL4P13236 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.04□□□□□ -1.76
CCL4P13236 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.04□□□□□ -1.76
CCL4P13236 AF213884.1-201ENST00000488102 463 ntBASIC4.04□□□□□ -1.76
CCL4P13236 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.04□□□□□ -1.76
CCL4P13236 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.04□□□□□ -1.76
CCL4P13236 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.04□□□□□ -1.76
CCL4P13236 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.04□□□□□ -1.76
CCL4P13236 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.04□□□□□ -1.76
CCL4P13236 AC053481.4-201ENST00000583164 216 ntBASIC4.04□□□□□ -1.76
CCL4P13236 MIR3158-1-201ENST00000583596 81 ntBASIC4.04□□□□□ -1.76
CCL4P13236 AC010201.1-201ENST00000605051 540 ntBASIC4.04□□□□□ -1.76
CCL4P13236 AC006133.1-201ENST00000617106 264 ntBASIC4.04□□□□□ -1.76
CCL4P13236 AC234782.5-201ENST00000617723 324 ntBASIC4.04□□□□□ -1.76
CCL4P13236 AC008013.2-202ENST00000637965 364 ntBASIC4.04□□□□□ -1.76
CCL4P13236 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.04□□□□□ -1.76
CCL4P13236 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms