Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 ZNF137P-201ENST00000456718 1920 ntBASIC4.84□□□□□ -1.63
KRT3P12035 AC108467.2-201ENST00000617640 1597 ntBASIC4.84□□□□□ -1.63
KRT3P12035 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
KRT3P12035 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRT3P12035 AC108751.5-201ENST00000492880 1336 ntBASIC4.84□□□□□ -1.63
KRT3P12035 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.84□□□□□ -1.63
KRT3P12035 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT3P12035 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
KRT3P12035 AC093719.1-202ENST00000392735 373 ntBASIC4.84□□□□□ -1.63
KRT3P12035 AL034403.1-201ENST00000399414 885 ntBASIC4.84□□□□□ -1.63
KRT3P12035 MIR298-201ENST00000401212 88 ntBASIC4.84□□□□□ -1.63
KRT3P12035 RNU2-50P-201ENST00000410494 143 ntBASIC4.84□□□□□ -1.63
KRT3P12035 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.84□□□□□ -1.63
KRT3P12035 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT3P12035 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRT3P12035 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT3P12035 AC093716.1-201ENST00000435923 377 ntBASIC4.84□□□□□ -1.63
KRT3P12035 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.84□□□□□ -1.63
KRT3P12035 AL935212.3-201ENST00000450729 284 ntBASIC4.84□□□□□ -1.63
KRT3P12035 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT3P12035 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.84□□□□□ -1.63
KRT3P12035 SCARNA10-201ENST00000459255 330 ntBASIC4.84□□□□□ -1.63
KRT3P12035 RN7SL610P-201ENST00000463845 291 ntBASIC4.84□□□□□ -1.63
KRT3P12035 AC083982.1-201ENST00000485679 344 ntBASIC4.84□□□□□ -1.63
KRT3P12035 OR9N1P-202ENST00000494289 481 ntBASIC4.84□□□□□ -1.63
KRT3P12035 AC105233.1-201ENST00000498840 781 ntBASIC4.84□□□□□ -1.63
KRT3P12035 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT3P12035 TCP11X3P-202ENST00000514289 1254 ntBASIC4.84□□□□□ -1.63
KRT3P12035 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT3P12035 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT3P12035 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT3P12035 RNA5SP360-201ENST00000516555 118 ntBASIC4.84□□□□□ -1.63
KRT3P12035 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT3P12035 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.84□□□□□ -1.63
KRT3P12035 AC051619.2-201ENST00000559063 397 ntBASIC4.84□□□□□ -1.63
KRT3P12035 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.84□□□□□ -1.63
KRT3P12035 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT3P12035 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT3P12035 HMGB2P1-201ENST00000591146 634 ntBASIC4.84□□□□□ -1.63
KRT3P12035 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.84□□□□□ -1.63
KRT3P12035 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.84□□□□□ -1.63
KRT3P12035 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
KRT3P12035 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
KRT3P12035 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
KRT3P12035 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.84□□□□□ -1.64
KRT3P12035 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
KRT3P12035 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
KRT3P12035 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRT3P12035 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRT3P12035 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
KRT3P12035 HSPD1P14-201ENST00000432666 1618 ntBASIC4.83□□□□□ -1.64
KRT3P12035 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.83□□□□□ -1.64
KRT3P12035 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.83□□□□□ -1.64
KRT3P12035 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRT3P12035 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRT3P12035 OR14L1P-202ENST00000641545 3009 ntBASIC4.83□□□□□ -1.64
KRT3P12035 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRT3P12035 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRT3P12035 SNORA58B-201ENST00000364259 136 ntBASIC4.83□□□□□ -1.64
KRT3P12035 SNORA71.2-201ENST00000364941 134 ntBASIC4.83□□□□□ -1.64
KRT3P12035 SNORD96B-201ENST00000386148 79 ntBASIC4.83□□□□□ -1.64
KRT3P12035 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRT3P12035 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
KRT3P12035 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.83□□□□□ -1.64
KRT3P12035 AL590806.1-201ENST00000415818 853 ntBASIC4.83□□□□□ -1.64
KRT3P12035 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRT3P12035 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRT3P12035 AL606490.7-201ENST00000433136 191 ntBASIC4.83□□□□□ -1.64
KRT3P12035 PPIAP13-201ENST00000434706 478 ntBASIC4.83□□□□□ -1.64
KRT3P12035 HMGB3P9-201ENST00000441799 583 ntBASIC4.83□□□□□ -1.64
KRT3P12035 AC245517.2-201ENST00000442890 346 ntBASIC4.83□□□□□ -1.64
KRT3P12035 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT3P12035 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT3P12035 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.83□□□□□ -1.64
KRT3P12035 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
KRT3P12035 AC021146.7-201ENST00000509604 775 ntBASIC4.83□□□□□ -1.64
KRT3P12035 AC007016.1-201ENST00000512110 244 ntBASIC4.83□□□□□ -1.64
KRT3P12035 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.83□□□□□ -1.64
KRT3P12035 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.83□□□□□ -1.64
KRT3P12035 IGKV1-32-201ENST00000519290 311 ntBASIC4.83□□□□□ -1.64
KRT3P12035 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT3P12035 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT3P12035 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT3P12035 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT3P12035 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.83□□□□□ -1.64
KRT3P12035 OR4H6P-202ENST00000603819 340 ntBASIC4.83□□□□□ -1.64
KRT3P12035 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.83□□□□□ -1.64
KRT3P12035 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.83□□□□□ -1.64
KRT3P12035 AC008966.2-201ENST00000606157 453 ntBASIC4.83□□□□□ -1.64
KRT3P12035 AL353600.1-201ENST00000608148 251 ntBASIC4.83□□□□□ -1.64
KRT3P12035 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.83□□□□□ -1.64
KRT3P12035 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.83□□□□□ -1.64
KRT3P12035 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.83□□□□□ -1.64
KRT3P12035 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRT3P12035 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRT3P12035 A2MP1-204ENST00000566278 4130 ntBASIC4.83□□□□□ -1.64
KRT3P12035 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRT3P12035 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRT3P12035 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRT3P12035 UGT2B26P-201ENST00000508672 1613 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms