Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TPM1P09493 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.88□□□□□ -1.63
TPM1P09493 RSU1P3-201ENST00000412878 835 ntBASIC4.88□□□□□ -1.63
TPM1P09493 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.88□□□□□ -1.63
TPM1P09493 RPL12P46-201ENST00000436610 195 ntBASIC4.88□□□□□ -1.63
TPM1P09493 CLIC4P1-201ENST00000453177 535 ntBASIC4.88□□□□□ -1.63
TPM1P09493 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.88□□□□□ -1.63
TPM1P09493 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.88□□□□□ -1.63
TPM1P09493 AC007016.1-201ENST00000512110 244 ntBASIC4.88□□□□□ -1.63
TPM1P09493 RNA5SP92-201ENST00000516437 110 ntBASIC4.88□□□□□ -1.63
TPM1P09493 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.88□□□□□ -1.63
TPM1P09493 IGKV3D-34-201ENST00000522638 302 ntBASIC4.88□□□□□ -1.63
TPM1P09493 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.88□□□□□ -1.63
TPM1P09493 SOX5P1-201ENST00000524155 1127 ntBASIC4.88□□□□□ -1.63
TPM1P09493 PHBP17-201ENST00000528576 541 ntBASIC4.88□□□□□ -1.63
TPM1P09493 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.88□□□□□ -1.63
TPM1P09493 AC008033.2-201ENST00000542626 177 ntBASIC4.88□□□□□ -1.63
TPM1P09493 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.88□□□□□ -1.63
TPM1P09493 AC090515.3-201ENST00000560431 315 ntBASIC4.88□□□□□ -1.63
TPM1P09493 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.88□□□□□ -1.63
TPM1P09493 AC025946.2-201ENST00000603398 234 ntBASIC4.88□□□□□ -1.63
TPM1P09493 MIR6768-201ENST00000610734 72 ntBASIC4.88□□□□□ -1.63
TPM1P09493 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.88□□□□□ -1.63
TPM1P09493 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.88□□□□□ -1.63
TPM1P09493 LINC01808-202ENST00000641680 1116 ntBASIC4.88□□□□□ -1.63
TPM1P09493 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TPM1P09493 INTS6P1-201ENST00000504674 2530 ntBASIC4.88□□□□□ -1.63
TPM1P09493 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TPM1P09493 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
TPM1P09493 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.88□□□□□ -1.63
TPM1P09493 AC092079.1-201ENST00000558620 1985 ntBASIC4.87□□□□□ -1.63
TPM1P09493 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
TPM1P09493 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TPM1P09493 OR1F12-201ENST00000402365 945 ntBASIC4.87□□□□□ -1.63
TPM1P09493 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.87□□□□□ -1.63
TPM1P09493 BX510359.2-201ENST00000417920 305 ntBASIC4.87□□□□□ -1.63
TPM1P09493 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.87□□□□□ -1.63
TPM1P09493 TRGV7-201ENST00000427089 353 ntBASIC4.87□□□□□ -1.63
TPM1P09493 RBMY2QP-201ENST00000429799 1147 ntBASIC4.87□□□□□ -1.63
TPM1P09493 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.87□□□□□ -1.63
TPM1P09493 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.87□□□□□ -1.63
TPM1P09493 AC146944.2-203ENST00000502493 354 ntBASIC4.87□□□□□ -1.63
TPM1P09493 AC139495.1-202ENST00000513164 354 ntBASIC4.87□□□□□ -1.63
TPM1P09493 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.87□□□□□ -1.63
TPM1P09493 RN7SKP276-201ENST00000516242 268 ntBASIC4.87□□□□□ -1.63
TPM1P09493 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.87□□□□□ -1.63
TPM1P09493 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.87□□□□□ -1.63
TPM1P09493 BGLT3-201ENST00000564523 994 ntBASIC4.87□□□□□ -1.63
TPM1P09493 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TPM1P09493 AL512782.1-201ENST00000603093 364 ntBASIC4.87□□□□□ -1.63
TPM1P09493 AL139286.1-201ENST00000604465 483 ntBASIC4.87□□□□□ -1.63
TPM1P09493 AL160290.3-201ENST00000604869 165 ntBASIC4.87□□□□□ -1.63
TPM1P09493 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.87□□□□□ -1.63
TPM1P09493 MIR4302-201ENST00000638058 60 ntBASIC4.87□□□□□ -1.63
TPM1P09493 CPHL1P-201ENST00000461341 3407 ntBASIC4.87□□□□□ -1.63
TPM1P09493 AL445437.1-201ENST00000623157 3087 ntBASIC4.87□□□□□ -1.63
TPM1P09493 PHKBP1-201ENST00000450951 1951 ntBASIC4.87□□□□□ -1.63
TPM1P09493 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.87□□□□□ -1.63
TPM1P09493 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TPM1P09493 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TPM1P09493 AC125257.1-201ENST00000560400 2930 ntBASIC4.86□□□□□ -1.63
TPM1P09493 OR10AB1P-202ENST00000641219 1686 ntBASIC4.86□□□□□ -1.63
TPM1P09493 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
TPM1P09493 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TPM1P09493 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TPM1P09493 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
TPM1P09493 RNA5SP123-201ENST00000363244 119 ntBASIC4.86□□□□□ -1.63
TPM1P09493 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TPM1P09493 RN7SKP213-201ENST00000410746 298 ntBASIC4.86□□□□□ -1.63
TPM1P09493 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.86□□□□□ -1.63
TPM1P09493 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.86□□□□□ -1.63
TPM1P09493 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.86□□□□□ -1.63
TPM1P09493 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.86□□□□□ -1.63
TPM1P09493 RN7SL101P-201ENST00000496350 279 ntBASIC4.86□□□□□ -1.63
TPM1P09493 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TPM1P09493 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.86□□□□□ -1.63
TPM1P09493 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.86□□□□□ -1.63
TPM1P09493 NPM1P52-201ENST00000518264 846 ntBASIC4.86□□□□□ -1.63
TPM1P09493 AC021006.3-201ENST00000530771 192 ntBASIC4.86□□□□□ -1.63
TPM1P09493 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.86□□□□□ -1.63
TPM1P09493 AC105129.1-201ENST00000560250 297 ntBASIC4.86□□□□□ -1.63
TPM1P09493 RPL23AP97-201ENST00000568955 471 ntBASIC4.86□□□□□ -1.63
TPM1P09493 OR1F2P-201ENST00000570470 933 ntBASIC4.86□□□□□ -1.63
TPM1P09493 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.86□□□□□ -1.63
TPM1P09493 AL133338.2-201ENST00000604292 736 ntBASIC4.86□□□□□ -1.63
TPM1P09493 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TPM1P09493 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.86□□□□□ -1.63
TPM1P09493 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.86□□□□□ -1.63
TPM1P09493 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.86□□□□□ -1.63
TPM1P09493 AC074029.4-201ENST00000624796 1859 ntBASIC4.86□□□□□ -1.63
TPM1P09493 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TPM1P09493 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TPM1P09493 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TPM1P09493 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.85□□□□□ -1.63
TPM1P09493 AC016588.2-201ENST00000632484 3021 ntBASIC4.85□□□□□ -1.63
TPM1P09493 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TPM1P09493 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.85□□□□□ -1.63
TPM1P09493 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.85□□□□□ -1.63
TPM1P09493 AL355433.1-201ENST00000422804 300 ntBASIC4.85□□□□□ -1.63
TPM1P09493 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms