Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.17□□□□□ -1.58
COL1A1P02452 AC099522.1-202ENST00000514718 367 ntBASIC5.17□□□□□ -1.58
COL1A1P02452 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.17□□□□□ -1.58
COL1A1P02452 AP000889.1-201ENST00000530968 660 ntBASIC5.17□□□□□ -1.58
COL1A1P02452 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
COL1A1P02452 AL352979.3-201ENST00000553515 247 ntBASIC5.17□□□□□ -1.58
COL1A1P02452 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.17□□□□□ -1.58
COL1A1P02452 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
COL1A1P02452 TVP23BP1-201ENST00000557500 617 ntBASIC5.17□□□□□ -1.58
COL1A1P02452 AC027455.1-201ENST00000574104 594 ntBASIC5.17□□□□□ -1.58
COL1A1P02452 AL451086.1-201ENST00000605596 223 ntBASIC5.17□□□□□ -1.58
COL1A1P02452 AC008966.2-201ENST00000606157 453 ntBASIC5.17□□□□□ -1.58
COL1A1P02452 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.17□□□□□ -1.58
COL1A1P02452 AC140113.4-201ENST00000622087 222 ntBASIC5.17□□□□□ -1.58
COL1A1P02452 VPS35P1-201ENST00000563400 1518 ntBASIC5.17□□□□□ -1.58
COL1A1P02452 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.17□□□□□ -1.58
COL1A1P02452 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
COL1A1P02452 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
COL1A1P02452 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
COL1A1P02452 RNA5SP175-201ENST00000364275 119 ntBASIC5.16□□□□□ -1.58
COL1A1P02452 TRAV35-201ENST00000390462 330 ntBASIC5.16□□□□□ -1.58
COL1A1P02452 ENSAP1-201ENST00000392855 326 ntBASIC5.16□□□□□ -1.58
COL1A1P02452 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.16□□□□□ -1.58
COL1A1P02452 AL162151.2-201ENST00000448875 158 ntBASIC5.16□□□□□ -1.58
COL1A1P02452 AL133372.1-201ENST00000493565 745 ntBASIC5.16□□□□□ -1.58
COL1A1P02452 RNU6-513P-201ENST00000516104 104 ntBASIC5.16□□□□□ -1.58
COL1A1P02452 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.16□□□□□ -1.58
COL1A1P02452 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.16□□□□□ -1.58
COL1A1P02452 AC053481.4-201ENST00000583164 216 ntBASIC5.16□□□□□ -1.58
COL1A1P02452 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.16□□□□□ -1.58
COL1A1P02452 HMGB2P1-201ENST00000591146 634 ntBASIC5.16□□□□□ -1.58
COL1A1P02452 SNORD91B-202ENST00000608459 222 ntBASIC5.16□□□□□ -1.58
COL1A1P02452 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL1A1P02452 AC090220.1-201ENST00000593078 1699 ntBASIC5.16□□□□□ -1.58
COL1A1P02452 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.16□□□□□ -1.58
COL1A1P02452 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL1A1P02452 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL1A1P02452 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
COL1A1P02452 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
COL1A1P02452 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.15□□□□□ -1.58
COL1A1P02452 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL1A1P02452 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL1A1P02452 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL1A1P02452 AC106871.1-201ENST00000568324 3102 ntBASIC5.15□□□□□ -1.58
COL1A1P02452 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL1A1P02452 RNU1-20P-201ENST00000363314 162 ntBASIC5.15□□□□□ -1.58
COL1A1P02452 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
COL1A1P02452 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
COL1A1P02452 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
COL1A1P02452 ATP5F1P3-201ENST00000397213 657 ntBASIC5.15□□□□□ -1.58
COL1A1P02452 RNU6ATAC-201ENST00000408749 126 ntBASIC5.15□□□□□ -1.58
COL1A1P02452 RPS26P2-201ENST00000440331 348 ntBASIC5.15□□□□□ -1.58
COL1A1P02452 RPL23AP2-201ENST00000471227 466 ntBASIC5.15□□□□□ -1.58
COL1A1P02452 AF213884.1-201ENST00000488102 463 ntBASIC5.15□□□□□ -1.58
COL1A1P02452 RNA5SP73-201ENST00000516744 108 ntBASIC5.15□□□□□ -1.58
COL1A1P02452 AC023632.4-201ENST00000517783 191 ntBASIC5.15□□□□□ -1.58
COL1A1P02452 DYNLL1P4-201ENST00000549314 266 ntBASIC5.15□□□□□ -1.58
COL1A1P02452 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.15□□□□□ -1.58
COL1A1P02452 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL1A1P02452 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.15□□□□□ -1.58
COL1A1P02452 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.15□□□□□ -1.58
COL1A1P02452 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.15□□□□□ -1.58
COL1A1P02452 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
COL1A1P02452 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.15□□□□□ -1.59
COL1A1P02452 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL1A1P02452 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
COL1A1P02452 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL1A1P02452 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
COL1A1P02452 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.15□□□□□ -1.59
COL1A1P02452 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL1A1P02452 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL1A1P02452 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL1A1P02452 RNU6-761P-201ENST00000384148 107 ntBASIC5.14□□□□□ -1.59
COL1A1P02452 RNU11-4P-201ENST00000391149 133 ntBASIC5.14□□□□□ -1.59
COL1A1P02452 HMGB3P5-201ENST00000428894 612 ntBASIC5.14□□□□□ -1.59
COL1A1P02452 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.14□□□□□ -1.59
COL1A1P02452 ARAFP2-201ENST00000440565 559 ntBASIC5.14□□□□□ -1.59
COL1A1P02452 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.14□□□□□ -1.59
COL1A1P02452 RPS27AP15-201ENST00000447672 466 ntBASIC5.14□□□□□ -1.59
COL1A1P02452 AL358232.1-201ENST00000448030 501 ntBASIC5.14□□□□□ -1.59
COL1A1P02452 VN1R32P-201ENST00000452234 905 ntBASIC5.14□□□□□ -1.59
COL1A1P02452 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.14□□□□□ -1.59
COL1A1P02452 RNA5SP103-201ENST00000459503 118 ntBASIC5.14□□□□□ -1.59
COL1A1P02452 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.14□□□□□ -1.59
COL1A1P02452 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.14□□□□□ -1.59
COL1A1P02452 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC5.14□□□□□ -1.59
COL1A1P02452 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.14□□□□□ -1.59
COL1A1P02452 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.14□□□□□ -1.59
COL1A1P02452 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL1A1P02452 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.14□□□□□ -1.59
COL1A1P02452 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.14□□□□□ -1.59
COL1A1P02452 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.14□□□□□ -1.59
COL1A1P02452 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.14□□□□□ -1.59
COL1A1P02452 AC097505.1-201ENST00000610199 565 ntBASIC5.14□□□□□ -1.59
COL1A1P02452 MIR6075-201ENST00000620782 95 ntBASIC5.14□□□□□ -1.59
COL1A1P02452 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.14□□□□□ -1.59
COL1A1P02452 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.14□□□□□ -1.59
COL1A1P02452 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.14□□□□□ -1.59
COL1A1P02452 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
COL1A1P02452 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms