Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.17□□□□□ -1.58
MSI1O43347 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.17□□□□□ -1.58
MSI1O43347 MIR3934-201ENST00000579806 107 ntBASIC5.17□□□□□ -1.58
MSI1O43347 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.17□□□□□ -1.58
MSI1O43347 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.17□□□□□ -1.58
MSI1O43347 AC073387.2-201ENST00000604797 784 ntBASIC5.17□□□□□ -1.58
MSI1O43347 AL365400.2-201ENST00000605604 902 ntBASIC5.17□□□□□ -1.58
MSI1O43347 FAM25E-202ENST00000608562 189 ntBASIC5.17□□□□□ -1.58
MSI1O43347 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.17□□□□□ -1.58
MSI1O43347 AL035461.2-201ENST00000619201 524 ntBASIC5.17□□□□□ -1.58
MSI1O43347 AC006386.1-201ENST00000619436 415 ntBASIC5.17□□□□□ -1.58
MSI1O43347 AL158062.1-201ENST00000619632 745 ntBASIC5.17□□□□□ -1.58
MSI1O43347 AP000484.1-201ENST00000620067 1252 ntBASIC5.17□□□□□ -1.58
MSI1O43347 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.17□□□□□ -1.58
MSI1O43347 AC104985.3-201ENST00000623479 597 ntBASIC5.17□□□□□ -1.58
MSI1O43347 AP000676.4-201ENST00000624659 623 ntBASIC5.17□□□□□ -1.58
MSI1O43347 AC132825.7-201ENST00000638744 335 ntBASIC5.17□□□□□ -1.58
MSI1O43347 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.17□□□□□ -1.58
MSI1O43347 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.17□□□□□ -1.58
MSI1O43347 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
MSI1O43347 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
MSI1O43347 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.17□□□□□ -1.58
MSI1O43347 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.17□□□□□ -1.58
MSI1O43347 AP001642.1-201ENST00000624727 2117 ntBASIC5.17□□□□□ -1.58
MSI1O43347 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
MSI1O43347 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
MSI1O43347 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
MSI1O43347 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MSI1O43347 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
MSI1O43347 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MSI1O43347 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MSI1O43347 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MSI1O43347 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
MSI1O43347 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
MSI1O43347 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.16□□□□□ -1.58
MSI1O43347 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.16□□□□□ -1.58
MSI1O43347 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
MSI1O43347 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.16□□□□□ -1.58
MSI1O43347 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MSI1O43347 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MSI1O43347 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.16□□□□□ -1.58
MSI1O43347 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.16□□□□□ -1.58
MSI1O43347 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MSI1O43347 Z97832.1-201ENST00000402490 328 ntBASIC5.16□□□□□ -1.58
MSI1O43347 AL021331.1-201ENST00000402817 582 ntBASIC5.16□□□□□ -1.58
MSI1O43347 Y_RNA.625-201ENST00000411256 107 ntBASIC5.16□□□□□ -1.58
MSI1O43347 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.16□□□□□ -1.58
MSI1O43347 AC092634.2-201ENST00000428146 1010 ntBASIC5.16□□□□□ -1.58
MSI1O43347 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.16□□□□□ -1.58
MSI1O43347 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.16□□□□□ -1.58
MSI1O43347 AC099063.2-201ENST00000446360 662 ntBASIC5.16□□□□□ -1.58
MSI1O43347 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MSI1O43347 HSPE1P22-201ENST00000456856 327 ntBASIC5.16□□□□□ -1.58
MSI1O43347 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.16□□□□□ -1.58
MSI1O43347 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.16□□□□□ -1.58
MSI1O43347 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.16□□□□□ -1.58
MSI1O43347 AC245028.2-201ENST00000458673 253 ntBASIC5.16□□□□□ -1.58
MSI1O43347 RPS17P2-201ENST00000461663 408 ntBASIC5.16□□□□□ -1.58
MSI1O43347 MTCO2P6-201ENST00000463134 685 ntBASIC5.16□□□□□ -1.58
MSI1O43347 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.16□□□□□ -1.58
MSI1O43347 MTCO3P35-201ENST00000485582 781 ntBASIC5.16□□□□□ -1.58
MSI1O43347 IGLV2-34-201ENST00000490007 283 ntBASIC5.16□□□□□ -1.58
MSI1O43347 MTCYBP35-201ENST00000503630 1137 ntBASIC5.16□□□□□ -1.58
MSI1O43347 AC093534.1-201ENST00000504977 132 ntBASIC5.16□□□□□ -1.58
MSI1O43347 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC5.16□□□□□ -1.58
MSI1O43347 AC093752.1-206ENST00000511823 336 ntBASIC5.16□□□□□ -1.58
MSI1O43347 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.16□□□□□ -1.58
MSI1O43347 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.16□□□□□ -1.58
MSI1O43347 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.16□□□□□ -1.58
MSI1O43347 OR10V3P-201ENST00000525712 725 ntBASIC5.16□□□□□ -1.58
MSI1O43347 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.16□□□□□ -1.58
MSI1O43347 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.16□□□□□ -1.58
MSI1O43347 ZNF971P-201ENST00000562068 1249 ntBASIC5.16□□□□□ -1.58
MSI1O43347 AC011487.3-201ENST00000593607 453 ntBASIC5.16□□□□□ -1.58
MSI1O43347 AC018695.5-201ENST00000605872 315 ntBASIC5.16□□□□□ -1.58
MSI1O43347 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.16□□□□□ -1.58
MSI1O43347 AP004607.9-201ENST00000618202 316 ntBASIC5.16□□□□□ -1.58
MSI1O43347 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.16□□□□□ -1.58
MSI1O43347 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
MSI1O43347 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MSI1O43347 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
MSI1O43347 AL731532.2-201ENST00000623542 1953 ntBASIC5.16□□□□□ -1.58
MSI1O43347 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
MSI1O43347 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.16□□□□□ -1.58
MSI1O43347 ECM1P2-201ENST00000503354 1577 ntBASIC5.16□□□□□ -1.58
MSI1O43347 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
MSI1O43347 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
MSI1O43347 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
MSI1O43347 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
MSI1O43347 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
MSI1O43347 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
MSI1O43347 AC099654.2-201ENST00000433031 1980 ntBASIC5.15□□□□□ -1.58
MSI1O43347 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.15□□□□□ -1.58
MSI1O43347 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.15□□□□□ -1.58
MSI1O43347 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
MSI1O43347 MTCO1P7-201ENST00000419523 1542 ntBASIC5.15□□□□□ -1.58
MSI1O43347 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
MSI1O43347 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
MSI1O43347 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
MSI1O43347 UBE2V1P11-201ENST00000411559 285 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms