Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC28A1O00337 AL353597.2-202ENST00000434901 373 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC28A1O00337 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC28A1O00337 AC079168.2-201ENST00000453977 416 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 RN7SL515P-201ENST00000463999 297 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC28A1O00337 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC28A1O00337 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC28A1O00337 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC28A1O00337 MTND2P31-201ENST00000512602 616 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 RN7SKP141-201ENST00000516167 338 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 RNA5SP34-201ENST00000516887 130 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC28A1O00337 IGKV2D-10-201ENST00000520194 281 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 IGLV2-28-201ENST00000520681 304 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 AP003168.1-201ENST00000530091 307 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 GCSHP4-201ENST00000538792 439 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.51□□□□□ -1.69
SLC28A1O00337 AL109741.3-201ENST00000561748 592 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 AC011487.3-201ENST00000593607 453 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 AC087763.1-201ENST00000603391 286 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 AC008966.2-201ENST00000606157 453 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 MIR6826-201ENST00000617808 98 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 AC139769.3-201ENST00000618383 175 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 AC090617.9-201ENST00000623751 147 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC28A1O00337 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.51□□□□□ -1.69
SLC28A1O00337 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SLC28A1O00337 AL672167.1-203ENST00000641299 2975 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 AL442639.1-201ENST00000625030 1899 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC28A1O00337 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC28A1O00337 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.51□□□□□ -1.69
SLC28A1O00337 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC28A1O00337 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SLC28A1O00337 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC28A1O00337 MTCO1P11-201ENST00000429111 1528 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 ZNF90P1-201ENST00000480493 1951 ntBASIC4.51□□□□□ -1.69
SLC28A1O00337 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SLC28A1O00337 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC28A1O00337 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SLC28A1O00337 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC28A1O00337 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC28A1O00337 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC28A1O00337 SAMMSON-226ENST00000642089 1582 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 A2MP1-204ENST00000566278 4130 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC28A1O00337 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SLC28A1O00337 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SLC28A1O00337 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC28A1O00337 SNORA62.2-201ENST00000364672 152 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC28A1O00337 AC010385.1-201ENST00000412374 256 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC28A1O00337 CYCSP10-201ENST00000417973 294 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC28A1O00337 ARL2BPP3-201ENST00000421226 480 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 RPL21P43-201ENST00000425440 472 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SLC28A1O00337 MTND4P15-201ENST00000437913 1033 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC28A1O00337 H2AFZP5-201ENST00000446960 382 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 TRY2P-201ENST00000448860 689 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 AC010733.1-201ENST00000451515 401 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 snoU13.20-201ENST00000459180 104 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 AC008410.1-201ENST00000483777 339 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC28A1O00337 DEFB109F-201ENST00000491870 277 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.5□□□□□ -1.69
SLC28A1O00337 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC28A1O00337 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC28A1O00337 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC28A1O00337 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.5□□□□□ -1.69
SLC28A1O00337 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC28A1O00337 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.5□□□□□ -1.69
SLC28A1O00337 AL391358.1-201ENST00000605342 190 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 AL162574.2-201ENST00000614618 657 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC28A1O00337 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC28A1O00337 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SLC28A1O00337 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC28A1O00337 LINC01109-201ENST00000603837 3081 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.5□□□□□ -1.69
SLC28A1O00337 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC28A1O00337 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SLC28A1O00337 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
SLC28A1O00337 AC009229.4-201ENST00000623854 1947 ntBASIC4.5□□□□□ -1.69
SLC28A1O00337 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.5□□□□□ -1.69
SLC28A1O00337 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SLC28A1O00337 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.49□□□□□ -1.69
SLC28A1O00337 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC28A1O00337 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SLC28A1O00337 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC28A1O00337 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.49□□□□□ -1.69
SLC28A1O00337 RNU1-20P-201ENST00000363314 162 ntBASIC4.49□□□□□ -1.69
SLC28A1O00337 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SLC28A1O00337 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.49□□□□□ -1.69
SLC28A1O00337 RNA5SP372-201ENST00000390836 115 ntBASIC4.49□□□□□ -1.69
SLC28A1O00337 RN7SKP213-201ENST00000410746 298 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms