Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
TMX2-CTNND1H3BSU7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 MAPK10-253ENST00000641010 4072 ntBASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 SNORA70C-201ENST00000384538 135 ntBASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 MIR1193-201ENST00000408109 78 ntBASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 U3.35-201ENST00000408405 208 ntBASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 RPL21P108-201ENST00000413857 481 ntBASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 SCARNA10-201ENST00000459255 330 ntBASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC010469.1-201ENST00000463864 576 ntBASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 NPM1P6-201ENST00000521088 871 ntBASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC007224.1-201ENST00000564410 144 ntBASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC093249.4-201ENST00000564755 259 ntBASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 SLC25A36P1-201ENST00000590111 465 ntBASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC015813.4-201ENST00000610469 179 ntBASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC023509.5-201ENST00000617434 807 ntBASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TMX2-CTNND1H3BSU7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 AMZ2P2-201ENST00000406819 1057 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC011933.1-201ENST00000413334 321 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC007064.3-201ENST00000422608 359 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 RPS29P17-201ENST00000430795 166 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 CBX1P1-201ENST00000440184 427 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 RPL7P33-201ENST00000444159 742 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC108463.1-201ENST00000450258 347 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC116533.1-201ENST00000459748 321 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 ATP5G1P3-201ENST00000463301 410 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC025674.1-201ENST00000507074 324 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC068831.4-201ENST00000556118 109 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 MIR3160-1-201ENST00000577972 85 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC115989.2-201ENST00000578640 563 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 IPO5P1-202ENST00000600039 287 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 AL158196.1-201ENST00000616786 434 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC055839.1-201ENST00000634467 498 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 LINC01808-202ENST00000641680 1116 ntBASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 EOGT-210ENST00000615922 1931 ntBASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 RNA5SP52-201ENST00000362448 134 ntBASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 RN7SKP224-201ENST00000364140 325 ntBASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 SNORA57.1-201ENST00000391227 145 ntBASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 EIF4EP1-201ENST00000422311 642 ntBASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 RPS27AP12-201ENST00000429552 465 ntBASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.41□□□□□ -1.7
TMX2-CTNND1H3BSU7 OR6C71P-201ENST00000432580 913 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms