Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
HMGB1P1B2RPK0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB1P1B2RPK0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HMGB1P1B2RPK0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 MTND5P28-201ENST00000438005 1594 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 RNA5SP433-201ENST00000364491 114 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AL133412.1-201ENST00000380194 2992 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 COX6CP13-201ENST00000428703 226 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 NDUFS5P5-201ENST00000437256 321 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 PCNPP2-201ENST00000441651 455 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 RPL32P14-201ENST00000463196 378 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 RPS23P6-201ENST00000466136 431 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 SETP6-201ENST00000479329 568 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AP002884.1-201ENST00000479691 655 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AC121161.1-201ENST00000510606 652 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 RNU6-488P-201ENST00000515918 99 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 HMGB1P1-201ENST00000522557 636 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AP003049.1-201ENST00000529418 457 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 NIFKP8-201ENST00000560500 874 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AL020997.3-201ENST00000602843 359 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AC104687.2-201ENST00000604442 342 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AL158196.1-201ENST00000616786 434 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AC073055.1-201ENST00000456901 1621 ntBASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HMGB1P1B2RPK0 AP001486.2-201ENST00000561652 5113 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 SCARNA15-201ENST00000607520 4325 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AL391684.1-202ENST00000641293 1636 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 RNU1-150P-201ENST00000362491 162 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 RNU4-34P-201ENST00000410431 124 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 RNU2-72P-201ENST00000411175 163 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 MTND4P22-201ENST00000413116 1169 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 OR2AT2P-201ENST00000413438 905 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 P2RY10P2-201ENST00000416730 913 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 PNKDP1-201ENST00000435914 430 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AL138799.3-201ENST00000438968 350 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AC023194.2-201ENST00000465398 406 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 RPL21P71-201ENST00000465598 459 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 RPL23AP37-201ENST00000479658 549 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AC078817.1-201ENST00000492623 435 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 HPRT1P2-201ENST00000505250 544 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 TMEM248P1-201ENST00000510579 951 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 RNA5SP340-201ENST00000517132 107 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 HIGD1AP6-201ENST00000521833 279 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 CYCSP40-201ENST00000575927 294 ntBASIC5.24□□□□□ -1.57
HMGB1P1B2RPK0 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms