Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 RPL23AP37-201ENST00000479658 549 ntBASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 FABP5P12-201ENST00000515543 389 ntBASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 AC008015.1-201ENST00000555505 465 ntBASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 AC005341.1-201ENST00000571086 708 ntBASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 AC025165.5-201ENST00000602802 578 ntBASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 AC011939.3-201ENST00000613686 466 ntBASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 MIR7155-201ENST00000615925 56 ntBASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 AC024595.1-201ENST00000623088 387 ntBASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 CYP4F35P-202ENST00000636121 390 ntBASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 AC006042.3-201ENST00000454684 1469 ntBASIC6.22□□□□□ -1.41
PTPDC1A2A3K4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
PTPDC1A2A3K4 AL034549.2-201ENST00000618285 3373 ntBASIC6.21□□□□□ -1.41
PTPDC1A2A3K4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PTPDC1A2A3K4 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PTPDC1A2A3K4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
PTPDC1A2A3K4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 RNU1-43P-201ENST00000365052 165 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AL079342.2-201ENST00000403367 482 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AC027644.1-201ENST00000419595 298 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 GAPDHP25-201ENST00000447061 1001 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AC104634.1-201ENST00000452720 462 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 RPSAP50-201ENST00000481955 852 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 RN7SL808P-201ENST00000496066 299 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 RPF2P2-201ENST00000504693 896 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 OR5BM1P-201ENST00000512021 366 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AC083923.1-201ENST00000523708 376 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 PDCL2P2-201ENST00000533651 189 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AC027369.5-201ENST00000533838 755 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 HMGN2P6-201ENST00000551091 273 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 OR11J2P-201ENST00000555298 907 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 MTCO1P40-201ENST00000574371 625 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 MIR3691-201ENST00000578066 90 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 MTCYBP13-201ENST00000578634 1093 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AL392112.1-201ENST00000605115 829 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AL445222.1-201ENST00000607259 628 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 OR8G7P-201ENST00000616658 848 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 MIR6839-201ENST00000620425 113 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 MIR6730-201ENST00000622213 67 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AC007671.2-201ENST00000637344 619 ntBASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PTPDC1A2A3K4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
PTPDC1A2A3K4 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTPDC1A2A3K4 AC026523.2-201ENST00000625039 7739 ntBASIC6.2□□□□□ -1.42
PTPDC1A2A3K4 AL442128.2-201ENST00000620246 1824 ntBASIC6.2□□□□□ -1.42
PTPDC1A2A3K4 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTPDC1A2A3K4 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTPDC1A2A3K4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTPDC1A2A3K4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTPDC1A2A3K4 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTPDC1A2A3K4 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.2□□□□□ -1.42
PTPDC1A2A3K4 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTPDC1A2A3K4 BMS1P3-201ENST00000372011 932 ntBASIC6.2□□□□□ -1.42
PTPDC1A2A3K4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
PTPDC1A2A3K4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
PTPDC1A2A3K4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
PTPDC1A2A3K4 SNORA48.4-201ENST00000391089 134 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms