Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 RN7SL802P-201ENST00000577858 299 ntBASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 MIR5699-201ENST00000578903 90 ntBASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC083865.1-201ENST00000636634 831 ntBASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 LINC01739-205ENST00000641890 573 ntBASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TRBV4-1A0A0J9YWV2 NEAT1-202ENST00000501122 22743 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC017007.4-201ENST00000503353 1352 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 RPL23P2-201ENST00000320371 421 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 MIR620-201ENST00000385232 95 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AL024507.1-201ENST00000412741 274 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 MTCO3P4-201ENST00000419236 787 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 CHEK2P5-201ENST00000423877 246 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC005033.1-201ENST00000428904 813 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC005008.1-201ENST00000456151 612 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 RN7SL515P-201ENST00000463999 297 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC119751.4-201ENST00000507498 357 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC011411.1-201ENST00000509592 876 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 MORF4L1P3-201ENST00000525966 950 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC068620.3-201ENST00000602749 560 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC020910.3-201ENST00000603701 874 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC011458.1-201ENST00000604034 617 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC018618.2-201ENST00000604770 446 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC026979.4-201ENST00000606555 645 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AP000864.1-201ENST00000609424 650 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC245100.7-201ENST00000609678 442 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AL391834.2-201ENST00000609982 546 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 VN1R9P-201ENST00000614184 867 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC011815.3-201ENST00000624194 473 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC093311.1-201ENST00000506586 2021 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 HSPD1P11-201ENST00000508643 1702 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 SCN1A-220ENST00000641603 12506 ntBASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRBV4-1A0A0J9YWV2 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC083843.3-201ENST00000623679 2186 ntBASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AL031119.1-201ENST00000404707 1879 ntBASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 RNU6-171P-201ENST00000384354 107 ntBASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 RNU1-106P-201ENST00000384382 164 ntBASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 RNU6-452P-201ENST00000384406 107 ntBASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 MIR223-201ENST00000385204 110 ntBASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 RNU1-82P-201ENST00000390851 165 ntBASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 HMGB3P19-201ENST00000403971 560 ntBASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AP002530.1-201ENST00000405705 684 ntBASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 HMGB1P13-201ENST00000406019 642 ntBASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 UBE2V1P11-201ENST00000411559 285 ntBASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC004448.2-201ENST00000422360 586 ntBASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 FO393419.3-201ENST00000428741 282 ntBASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 YWHAZP2-201ENST00000440317 728 ntBASIC4.31□□□□□ -1.72
TRBV4-1A0A0J9YWV2 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms