Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC093535.2-201ENST00000624769 2326 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 LINC01355-201ENST00000566551 5444 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 RN7SKP160-201ENST00000363804 340 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 SNORD56.4-201ENST00000363883 71 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 RNU4-7P-201ENST00000364758 141 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC234772.1-201ENST00000377927 937 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AL512430.2-201ENST00000406786 339 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 RN7SKP114-201ENST00000410327 279 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 XKRYP4-201ENST00000414395 483 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 UBE2V1P9-201ENST00000414760 368 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 PTP4A1P7-201ENST00000423476 514 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 CKS1BP6-201ENST00000424932 240 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 MED6P1-201ENST00000439659 713 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 EXOSC3P1-201ENST00000448649 500 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 XKRYP5-201ENST00000449659 483 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 RHEBP2-201ENST00000450289 600 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 RPS17P2-201ENST00000461663 408 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 RN7SL184P-201ENST00000488308 297 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC008427.1-201ENST00000503102 655 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 ATP5LP3-201ENST00000514223 304 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 HMGB1P19-201ENST00000517578 577 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 MTCO2P2-201ENST00000591258 225 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AL160237.3-201ENST00000604114 1013 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC099785.1-201ENST00000605697 437 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 OR7A19P-201ENST00000608051 733 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 RNU6-1192P-201ENST00000612197 107 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 RNU6-489P-201ENST00000618289 107 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AL669942.2-201ENST00000620352 697 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC015908.5-201ENST00000623289 343 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 AC009643.2-201ENST00000603543 1448 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 CASC19-206ENST00000641028 1430 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 SALL4P2-201ENST00000423288 2910 ntBASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
MRPS28Q9Y2Q9 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
MRPS28Q9Y2Q9 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
MRPS28Q9Y2Q9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
MRPS28Q9Y2Q9 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
MRPS28Q9Y2Q9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
MRPS28Q9Y2Q9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
MRPS28Q9Y2Q9 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
MRPS28Q9Y2Q9 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
MRPS28Q9Y2Q9 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
MRPS28Q9Y2Q9 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
MRPS28Q9Y2Q9 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms