Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 NAP1L1P3-201ENST00000462291 880 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC004263.1-201ENST00000479327 332 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC098583.1-201ENST00000480875 255 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC023424.1-201ENST00000496058 459 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC093752.1-206ENST00000511823 336 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC108120.2-201ENST00000512973 294 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC092593.2-201ENST00000513866 913 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 SEPT10P1-201ENST00000517342 1162 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 MTCYBP19-201ENST00000517463 1124 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC079064.1-201ENST00000528365 362 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AP002373.2-201ENST00000541631 1060 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AL358913.1-201ENST00000554342 121 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC009027.1-201ENST00000604510 479 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 MIR6748-201ENST00000610433 71 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 RPL23AP61-201ENST00000623642 466 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 AC090897.3-201ENST00000636973 1157 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 SPATA2P1-201ENST00000431223 2055 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.63□□□□□ -1.51
SSX2IPQ9Y2D8 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 INTS6P1-201ENST00000504674 2530 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 U6.112-201ENST00000384129 70 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 RNA5SP105-201ENST00000391123 113 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 MTCO3P4-201ENST00000419236 787 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 HIGD1AP4-201ENST00000430194 280 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 PA2G4P6-201ENST00000438325 1197 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 H2AFZP6-201ENST00000444403 394 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 Z99714.1-201ENST00000450463 807 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 HMGB1P5-202ENST00000451497 985 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 AC104634.1-201ENST00000452720 462 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 AP000563.1-201ENST00000490865 758 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 RPL5P23-201ENST00000496040 868 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 MTCYBP27-201ENST00000555160 670 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 MIR4789-201ENST00000577469 82 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 AC025588.2-201ENST00000604851 466 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 AC093799.2-201ENST00000610062 578 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 SUCLA2P2-201ENST00000417269 1309 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SSX2IPQ9Y2D8 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms