Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AC062022.1-201ENST00000451026 1684 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 RNU6-560P-201ENST00000364007 108 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 SNRPEP2-201ENST00000397592 279 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AL122016.1-201ENST00000403365 367 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 OSTCP4-201ENST00000424397 449 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 EMC3-AS1-205ENST00000438698 534 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AC010240.2-201ENST00000445363 1205 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 RPL39P6-201ENST00000448289 150 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 SNORD42A-201ENST00000459584 64 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AC131392.1-201ENST00000506490 633 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 DUTP7-201ENST00000507982 486 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AC107222.1-201ENST00000510899 637 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 HSPA8P13-201ENST00000523715 472 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 MIR3913-1-201ENST00000577744 102 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 MIR3614-201ENST00000581261 86 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AC103881.1-201ENST00000603476 538 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AC091193.1-201ENST00000604640 448 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 U4.1-201ENST00000620349 87 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AC024884.1-201ENST00000620583 399 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 SNX18P12-201ENST00000624821 759 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AC073488.6-201ENST00000632293 754 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AL353743.4-201ENST00000422653 1547 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 SAMM50P1-201ENST00000455403 1399 ntBASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
PDZRN3Q9UPQ7 GLYATL1P1-201ENST00000528297 1607 ntBASIC8.21□□□□□ -1.09
PDZRN3Q9UPQ7 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
PDZRN3Q9UPQ7 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.09
PDZRN3Q9UPQ7 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PDZRN3Q9UPQ7 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC8.21□□□□□ -1.09
PDZRN3Q9UPQ7 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
PDZRN3Q9UPQ7 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC8.21□□□□□ -1.09
PDZRN3Q9UPQ7 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
PDZRN3Q9UPQ7 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PDZRN3Q9UPQ7 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
PDZRN3Q9UPQ7 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.21□□□□□ -1.09
PDZRN3Q9UPQ7 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 KARSP1-201ENST00000451871 1752 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 ZNF734P-201ENST00000419494 1534 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 SMARCE1P6-201ENST00000398372 1216 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AL512422.1-201ENST00000407033 553 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 RPL17P12-201ENST00000413391 526 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AC009302.1-201ENST00000417147 390 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 Z82205.1-201ENST00000428456 297 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 CLUHP1-201ENST00000435012 1190 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AL022238.1-201ENST00000442557 355 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AL672138.1-201ENST00000450604 1015 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 Y_RNA.632-201ENST00000459189 102 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 GM2AP2-201ENST00000491764 562 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 RPL19P11-201ENST00000495944 589 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AC093770.1-201ENST00000511559 571 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AC008429.2-201ENST00000523057 864 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AC084337.1-201ENST00000524809 686 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AC239860.2-201ENST00000525886 270 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 MTCO3P15-201ENST00000526563 574 ntBASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC8.21□□□□□ -1.1
PDZRN3Q9UPQ7 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms