Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AC092045.1-201ENST00000495716 1231 ntBASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AC091965.2-201ENST00000512324 613 ntBASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 HSPE1P2-201ENST00000554777 306 ntBASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AC011445.2-201ENST00000599274 173 ntBASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AF131215.7-201ENST00000602443 707 ntBASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AC009878.1-201ENST00000621819 340 ntBASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AL359757.1-201ENST00000623176 255 ntBASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 AL031595.2-201ENST00000624215 19071 ntBASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 OR10AB1P-202ENST00000641219 1686 ntBASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
PACSIN3Q9UKS6 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AC004817.4-201ENST00000602396 3625 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AC100757.1-201ENST00000616872 1835 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 SLC10A5P1-201ENST00000379063 1306 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 GAPDHP24-201ENST00000328713 983 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 RNU1-150P-201ENST00000362491 162 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 MTCO1P56-201ENST00000401674 224 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AK4P4-201ENST00000419465 646 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 DPRXP1-201ENST00000426312 460 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 RPL7P56-201ENST00000429441 717 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AL161636.2-201ENST00000445179 927 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 RN7SL188P-201ENST00000469842 285 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AC105918.1-201ENST00000474399 838 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AC016687.1-201ENST00000482574 353 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AC073610.1-201ENST00000489971 396 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AC113430.1-201ENST00000506872 718 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 DUTP7-201ENST00000507982 486 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 PGBD4P4-201ENST00000509673 613 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AC106872.4-201ENST00000510050 523 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 RNU6-319P-201ENST00000516025 108 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 RNU6-1178P-201ENST00000516674 107 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 GTF2IP11-201ENST00000526931 420 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 PMS2P3-207ENST00000529061 717 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AL139174.1-201ENST00000531489 886 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AC002400.1-201ENST00000569310 726 ntBASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.3□□□□□ -1.56
PACSIN3Q9UKS6 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms