Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AL627171.1-201ENST00000618845 1308 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 RNU6-1251P-201ENST00000364502 107 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 MIR192-201ENST00000384915 110 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 MIR137-201ENST00000385223 102 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 EI24P3-201ENST00000399046 1062 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 RN7SKP267-201ENST00000410381 285 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 NPM1P40-201ENST00000412758 733 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 PTP4A1P1-201ENST00000420539 515 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 TDGF1P1-201ENST00000445734 527 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 AC090142.1-201ENST00000465776 462 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 RPL23AP72-201ENST00000492447 435 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 AC025164.1-201ENST00000496249 478 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 AC007016.1-201ENST00000512110 244 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 LSM3P2-201ENST00000551246 273 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 RN7SL339P-201ENST00000580597 296 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 AC091057.3-201ENST00000602684 733 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 AC023762.1-201ENST00000603280 584 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 OR7A19P-201ENST00000608051 733 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 AC109809.1-201ENST00000619665 545 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 AC004232.3-201ENST00000622977 525 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 AC097520.1-201ENST00000624435 385 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 FRG1DP-201ENST00000635586 771 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 AC027228.2-201ENST00000567141 2154 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SIX4Q9UIU6 THAP12P5-201ENST00000405864 2275 ntBASIC5.02□□□□□ -1.61
SIX4Q9UIU6 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AL356317.1-201ENST00000396110 1436 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 RNU6-1257P-201ENST00000384625 110 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 RPS16P5-201ENST00000406501 404 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AL138878.2-201ENST00000440581 1241 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 SNRPFP2-201ENST00000440710 251 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AC012512.1-201ENST00000446594 718 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 NPM1P29-201ENST00000483112 803 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 MTND4LP2-201ENST00000502312 285 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 TRAV31-201ENST00000502780 342 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 OR5AN2P-201ENST00000534535 896 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AL121839.1-201ENST00000556233 1185 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 YWHAZP1-201ENST00000556286 722 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AC009852.2-201ENST00000567898 485 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AC015849.2-201ENST00000605738 409 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AC026741.1-201ENST00000605892 482 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AC015722.2-201ENST00000622210 551 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 AP003476.1-201ENST00000623984 516 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 MTND5P23-201ENST00000430812 1655 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 KARSP3-201ENST00000571212 1504 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 SAMMSON-213ENST00000641336 1521 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 Z98755.1-201ENST00000407015 1384 ntBASIC5.01□□□□□ -1.61
SIX4Q9UIU6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
SIX4Q9UIU6 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5□□□□□ -1.61
SIX4Q9UIU6 AC000374.1-201ENST00000434698 1745 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms