Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC011416.1-201ENST00000514947 1732 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC020633.1-201ENST00000468439 2247 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AL121949.2-201ENST00000403446 1548 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 RNU6-1066P-201ENST00000363573 105 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 SNORA70.5-201ENST00000365519 135 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AL451142.1-201ENST00000375867 775 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 RNU6-1297P-201ENST00000384415 104 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 CISD1P1-201ENST00000393907 327 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 TMSB4XP8-201ENST00000402089 135 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 TMSB4XP6-201ENST00000415187 135 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AC114814.2-201ENST00000419195 485 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 GAPDHP49-201ENST00000421421 961 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 TMSB4XP1-201ENST00000424567 135 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 OR51AB1P-201ENST00000429046 620 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AC064862.5-201ENST00000440618 334 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 SNORA81.1-201ENST00000458922 177 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AC010655.3-201ENST00000478818 450 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 RN7SL797P-201ENST00000486314 297 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 HMGB1P28-201ENST00000507778 552 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AC022634.1-201ENST00000520765 532 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AC008269.2-201ENST00000561915 1105 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AC018552.1-201ENST00000562099 811 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AC090751.1-201ENST00000566966 267 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 MIR4742-201ENST00000581069 85 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AC122710.3-201ENST00000606566 541 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AC006924.1-201ENST00000610750 559 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 AL121768.1-201ENST00000613917 2544 ntBASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CUEDC1Q9NWM3 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 GNG5P1-201ENST00000255500 204 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 Y_RNA.149-201ENST00000363558 117 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 DEFB109C-201ENST00000382575 264 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 DEFB109B-201ENST00000382656 264 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 SNORA69-201ENST00000383895 132 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 RPS4XP8-201ENST00000402039 771 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 AL450338.1-201ENST00000407987 512 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 MIR548F4-201ENST00000408515 105 ntBASIC6.85□□□□□ -1.31
CUEDC1Q9NWM3 RN7SKP254-201ENST00000410685 310 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms