Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC009965.2-201ENST00000425328 970 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 USP9YP25-201ENST00000457708 443 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC006511.1-201ENST00000470614 315 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 RN7SL184P-201ENST00000488308 297 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 MTCYBP35-201ENST00000503630 1137 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 RPL7L1P4-201ENST00000513004 707 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 MTND2P38-201ENST00000522536 667 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC023538.1-201ENST00000534576 736 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC122688.1-201ENST00000541494 223 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 RN7SL753P-201ENST00000581238 290 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 MIR4472-2-201ENST00000582069 67 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 H3F3BP2-201ENST00000583907 357 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 MIR3936-201ENST00000584304 110 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AP001269.3-201ENST00000588718 329 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC123786.2-201ENST00000603459 275 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC010245.2-201ENST00000606908 1167 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC007204.2-201ENST00000615022 616 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AP000756.2-201ENST00000624168 2567 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 ZNF876P-202ENST00000398732 1485 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC104623.2-202ENST00000623477 4002 ntBASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NECTIN3Q9NQS3 AC022031.1-201ENST00000585985 2593 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC025574.1-201ENST00000554784 1653 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 CASC19-248ENST00000641674 1356 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 RNA5SP319-201ENST00000362768 119 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 SNORA51.1-201ENST00000363243 140 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 snoZ40.1-201ENST00000364540 72 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 SNORA16A-201ENST00000384342 137 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 MIR143-201ENST00000385300 106 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 RNA5SP241-201ENST00000391326 114 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 NCSTNP1-201ENST00000406229 144 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 OR3A2-201ENST00000408891 1076 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 GNG5P5-201ENST00000420444 220 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 NANOGP4-201ENST00000427230 913 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 CNOT7P1-201ENST00000429006 852 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 HIGD1AP4-201ENST00000430194 280 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC007327.1-201ENST00000447461 264 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AURKAPS1-201ENST00000451805 1212 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC100832.1-201ENST00000471945 383 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC015724.1-201ENST00000478577 156 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 RN7SL547P-201ENST00000490793 290 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC090638.1-201ENST00000498296 909 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC091951.3-201ENST00000504093 246 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC092593.2-201ENST00000513866 913 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 RN7SKP99-201ENST00000517028 307 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 DUXAP5-201ENST00000529668 529 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AP005403.1-201ENST00000579720 229 ntBASIC5.18□□□□□ -1.58
NECTIN3Q9NQS3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 215.3 ms