Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.73
CCNB1IP1Q9NPC3 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 MTND4P26-201ENST00000415971 1359 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AC114546.3-201ENST00000623582 1734 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AL645733.1-201ENST00000402250 217 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AL589647.1-201ENST00000402485 466 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 RN7SKP222-201ENST00000410651 315 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 DPPA2P3-201ENST00000411853 655 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 GTF2IP5-201ENST00000414608 731 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AC019050.1-201ENST00000418508 492 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 RPL23AP25-201ENST00000430973 463 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 RPL7P33-201ENST00000444159 742 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 TRY2P-201ENST00000448860 689 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AC234781.3-201ENST00000452540 973 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 IFNWP4-201ENST00000453148 294 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 C1DP3-201ENST00000455013 423 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 SEPT14P1-201ENST00000458703 648 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AC090013.1-201ENST00000485147 480 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AC010627.1-201ENST00000503819 1294 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AC008638.1-201ENST00000506035 866 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AC117525.1-201ENST00000515228 503 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 IGLV3-26-201ENST00000520756 302 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AL049839.1-201ENST00000556151 657 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AC044860.2-201ENST00000561005 179 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 HNRNPCP4-201ENST00000571636 900 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 NPM1P45-201ENST00000583151 559 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 BMS1P7-201ENST00000602440 1052 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AC013244.1-201ENST00000604279 193 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AC211433.2-201ENST00000608433 387 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AC068870.2-201ENST00000620635 389 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 AL049555.1-201ENST00000562834 1933 ntBASIC4.27□□□□□ -1.73
CCNB1IP1Q9NPC3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 AL031119.1-201ENST00000404707 1879 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 INTS6P1-201ENST00000504674 2530 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 AC010300.1-201ENST00000600671 5134 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 RN7SKP95-201ENST00000362860 303 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 RN7SKP115-201ENST00000363177 317 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 RNA5SP123-201ENST00000363244 119 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 RNU1-44P-201ENST00000384453 163 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 RNU6-146P-201ENST00000384602 108 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 VN1R8P-201ENST00000407739 893 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 AC004552.1-201ENST00000419089 348 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 LINC00993-201ENST00000420453 540 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 RPL12P34-201ENST00000424532 479 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 AC092013.1-201ENST00000438795 332 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 SUMO2P1-206ENST00000445436 284 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 RPS26P3-201ENST00000470205 348 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 AC090543.2-201ENST00000483963 348 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 AC004057.1-201ENST00000485827 348 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.26□□□□□ -1.73
CCNB1IP1Q9NPC3 IFITM8P-201ENST00000522529 394 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms