Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC211433.2-201ENST00000608433 387 ntBASIC5.49□□□□□ -1.53
SMOQ99835 RPSAP73-201ENST00000614820 330 ntBASIC5.49□□□□□ -1.53
SMOQ99835 VN1R7P-201ENST00000619242 903 ntBASIC5.49□□□□□ -1.53
SMOQ99835 MIR6839-201ENST00000620425 113 ntBASIC5.49□□□□□ -1.53
SMOQ99835 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.49□□□□□ -1.53
SMOQ99835 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.49□□□□□ -1.53
SMOQ99835 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
SMOQ99835 AC005261.4-201ENST00000600047 1385 ntBASIC5.49□□□□□ -1.53
SMOQ99835 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SMOQ99835 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.49□□□□□ -1.53
SMOQ99835 PROS2P-201ENST00000474651 1951 ntBASIC5.49□□□□□ -1.53
SMOQ99835 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.49□□□□□ -1.53
SMOQ99835 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMOQ99835 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
SMOQ99835 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.48□□□□□ -1.53
SMOQ99835 AC114947.2-201ENST00000565748 2125 ntBASIC5.48□□□□□ -1.53
SMOQ99835 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMOQ99835 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMOQ99835 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
SMOQ99835 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMOQ99835 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.48□□□□□ -1.53
SMOQ99835 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SMOQ99835 FAM133CP-201ENST00000332869 704 ntBASIC5.48□□□□□ -1.53
SMOQ99835 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMOQ99835 RNA5SP507-201ENST00000363603 121 ntBASIC5.48□□□□□ -1.53
SMOQ99835 RNU1-74P-201ENST00000384108 171 ntBASIC5.48□□□□□ -1.53
SMOQ99835 RNU6-532P-201ENST00000384318 107 ntBASIC5.48□□□□□ -1.53
SMOQ99835 RNU6-549P-201ENST00000384433 107 ntBASIC5.48□□□□□ -1.53
SMOQ99835 SNORA70-201ENST00000384436 135 ntBASIC5.48□□□□□ -1.53
SMOQ99835 SNORA40.2-201ENST00000390847 128 ntBASIC5.48□□□□□ -1.53
SMOQ99835 HNRNPDP2-201ENST00000406475 478 ntBASIC5.48□□□□□ -1.53
SMOQ99835 RNU4-72P-201ENST00000410754 173 ntBASIC5.48□□□□□ -1.53
SMOQ99835 GPS2P1-201ENST00000411761 986 ntBASIC5.48□□□□□ -1.53
SMOQ99835 DPY19L1P2-201ENST00000426647 915 ntBASIC5.48□□□□□ -1.53
SMOQ99835 RPL23AP4-201ENST00000427757 463 ntBASIC5.48□□□□□ -1.53
SMOQ99835 LYPLA1P1-201ENST00000434514 622 ntBASIC5.48□□□□□ -1.53
SMOQ99835 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.48□□□□□ -1.53
SMOQ99835 COX7BP2-201ENST00000437976 242 ntBASIC5.48□□□□□ -1.53
SMOQ99835 CDY12P-201ENST00000440679 1015 ntBASIC5.48□□□□□ -1.53
SMOQ99835 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.48□□□□□ -1.53
SMOQ99835 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.48□□□□□ -1.53
SMOQ99835 CDY13P-201ENST00000445813 1015 ntBASIC5.48□□□□□ -1.53
SMOQ99835 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.48□□□□□ -1.53
SMOQ99835 RN7SL189P-201ENST00000468631 289 ntBASIC5.48□□□□□ -1.53
SMOQ99835 RPSAP51-201ENST00000497462 645 ntBASIC5.48□□□□□ -1.53
SMOQ99835 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.48□□□□□ -1.53
SMOQ99835 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.48□□□□□ -1.53
SMOQ99835 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.48□□□□□ -1.53
SMOQ99835 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.48□□□□□ -1.53
SMOQ99835 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.48□□□□□ -1.53
SMOQ99835 EIF3KP3-201ENST00000514461 639 ntBASIC5.48□□□□□ -1.53
SMOQ99835 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMOQ99835 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.48□□□□□ -1.53
SMOQ99835 snoZ278.1-201ENST00000517059 112 ntBASIC5.48□□□□□ -1.53
SMOQ99835 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.48□□□□□ -1.53
SMOQ99835 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.48□□□□□ -1.53
SMOQ99835 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.48□□□□□ -1.53
SMOQ99835 AP002373.2-201ENST00000541631 1060 ntBASIC5.48□□□□□ -1.53
SMOQ99835 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SMOQ99835 HMGN2P6-201ENST00000551091 273 ntBASIC5.48□□□□□ -1.53
SMOQ99835 SETP1-201ENST00000556014 845 ntBASIC5.48□□□□□ -1.53
SMOQ99835 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SMOQ99835 MTCO1P40-201ENST00000574371 625 ntBASIC5.48□□□□□ -1.53
SMOQ99835 RN7SL290P-201ENST00000578661 300 ntBASIC5.48□□□□□ -1.53
SMOQ99835 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.48□□□□□ -1.53
SMOQ99835 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.48□□□□□ -1.53
SMOQ99835 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.48□□□□□ -1.53
SMOQ99835 AC011447.4-201ENST00000587562 111 ntBASIC5.48□□□□□ -1.53
SMOQ99835 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.48□□□□□ -1.53
SMOQ99835 AC121247.2-201ENST00000604776 136 ntBASIC5.48□□□□□ -1.53
SMOQ99835 AL450489.1-201ENST00000612071 468 ntBASIC5.48□□□□□ -1.53
SMOQ99835 AC103706.2-201ENST00000638080 240 ntBASIC5.48□□□□□ -1.53
SMOQ99835 AC125336.1-201ENST00000508893 2827 ntBASIC5.48□□□□□ -1.53
SMOQ99835 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.48□□□□□ -1.53
SMOQ99835 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMOQ99835 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.48□□□□□ -1.53
SMOQ99835 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SMOQ99835 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.47□□□□□ -1.53
SMOQ99835 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMOQ99835 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMOQ99835 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMOQ99835 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.47□□□□□ -1.53
SMOQ99835 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMOQ99835 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.47□□□□□ -1.53
SMOQ99835 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMOQ99835 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMOQ99835 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMOQ99835 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMOQ99835 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMOQ99835 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SMOQ99835 RNU6-413P-201ENST00000384115 107 ntBASIC5.47□□□□□ -1.53
SMOQ99835 RNU11-201ENST00000387069 134 ntBASIC5.47□□□□□ -1.53
SMOQ99835 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SMOQ99835 RNA5SP241-201ENST00000391326 114 ntBASIC5.47□□□□□ -1.53
SMOQ99835 AL035419.1-201ENST00000397037 564 ntBASIC5.47□□□□□ -1.53
SMOQ99835 RN7SKP213-201ENST00000410746 298 ntBASIC5.47□□□□□ -1.53
SMOQ99835 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SMOQ99835 BRWD1P3-201ENST00000428816 390 ntBASIC5.47□□□□□ -1.53
SMOQ99835 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC5.47□□□□□ -1.53
SMOQ99835 AC090018.1-201ENST00000434369 367 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms