Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AL645937.3-201ENST00000453647 936 ntBASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 AC104689.1-201ENST00000473356 768 ntBASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 RN7SL799P-201ENST00000475891 298 ntBASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 RPL15P21-201ENST00000495592 567 ntBASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 CDH12P2-201ENST00000504393 298 ntBASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 AC104090.1-201ENST00000506341 1171 ntBASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 AC021146.8-201ENST00000507455 733 ntBASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 AC095057.3-201ENST00000567102 1157 ntBASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 AC099654.6-201ENST00000636487 512 ntBASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CHAMP1Q96JM3 AC007342.5-201ENST00000571340 2142 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 SNORD56.6-201ENST00000384569 71 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 MT-TP-201ENST00000387461 68 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC093084.1-201ENST00000424233 687 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 PTMAP6-201ENST00000439110 327 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC092170.1-201ENST00000440211 356 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 IGBP1P3-201ENST00000447449 1000 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC231760.1-201ENST00000498002 260 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 RNA5SP34-201ENST00000516887 130 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 HIGD1AP18-201ENST00000520730 278 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC022880.1-201ENST00000534017 973 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 ACTR3BP3-201ENST00000565577 979 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC092121.1-201ENST00000569452 202 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 MTCO1P40-201ENST00000574371 625 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 MIR4660-201ENST00000583549 74 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 MIR4999-201ENST00000585029 91 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 DUXAP11-201ENST00000603858 526 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC107304.1-201ENST00000604229 296 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC096553.1-201ENST00000605169 829 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AL021997.1-201ENST00000605757 193 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC092653.1-201ENST00000608509 531 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC019131.2-201ENST00000609071 870 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC018445.2-201ENST00000622987 260 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 ZNF663P-202ENST00000641770 1131 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 BCORP1-203ENST00000513194 5093 ntBASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHAMP1Q96JM3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHAMP1Q96JM3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHAMP1Q96JM3 MT-RNR2-201ENST00000387347 1559 ntBASIC6.31□□□□□ -1.4
CHAMP1Q96JM3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.31□□□□□ -1.4
CHAMP1Q96JM3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHAMP1Q96JM3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
CHAMP1Q96JM3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHAMP1Q96JM3 TTC39DP-201ENST00000416781 1688 ntBASIC6.31□□□□□ -1.4
CHAMP1Q96JM3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHAMP1Q96JM3 OR52B3P-201ENST00000314715 928 ntBASIC6.31□□□□□ -1.4
CHAMP1Q96JM3 RNU6-543P-201ENST00000362576 108 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms