Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.34□□□□□ -1.55
SNED1Q8TER0 AL445584.1-201ENST00000431451 330 ntBASIC5.34□□□□□ -1.55
SNED1Q8TER0 AC012671.1-201ENST00000451912 203 ntBASIC5.34□□□□□ -1.55
SNED1Q8TER0 PPP1R11P1-201ENST00000486095 376 ntBASIC5.34□□□□□ -1.55
SNED1Q8TER0 HMGB3P16-201ENST00000508037 287 ntBASIC5.34□□□□□ -1.55
SNED1Q8TER0 AL592156.1-201ENST00000508758 304 ntBASIC5.34□□□□□ -1.55
SNED1Q8TER0 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SNED1Q8TER0 PGBD4P4-201ENST00000509673 613 ntBASIC5.34□□□□□ -1.55
SNED1Q8TER0 SETP12-201ENST00000514068 805 ntBASIC5.34□□□□□ -1.55
SNED1Q8TER0 AP003168.1-201ENST00000530091 307 ntBASIC5.34□□□□□ -1.55
SNED1Q8TER0 CCNG2P1-201ENST00000549521 1000 ntBASIC5.34□□□□□ -1.55
SNED1Q8TER0 AP005901.4-201ENST00000577336 569 ntBASIC5.34□□□□□ -1.55
SNED1Q8TER0 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SNED1Q8TER0 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.34□□□□□ -1.55
SNED1Q8TER0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.34□□□□□ -1.55
SNED1Q8TER0 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNED1Q8TER0 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SNED1Q8TER0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNED1Q8TER0 AL359922.3-201ENST00000624779 1670 ntBASIC5.34□□□□□ -1.55
SNED1Q8TER0 AC139769.1-204ENST00000472297 1931 ntBASIC5.34□□□□□ -1.55
SNED1Q8TER0 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SNED1Q8TER0 AL136164.3-201ENST00000624429 3978 ntBASIC5.34□□□□□ -1.55
SNED1Q8TER0 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.34□□□□□ -1.56
SNED1Q8TER0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SNED1Q8TER0 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.34□□□□□ -1.56
SNED1Q8TER0 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SNED1Q8TER0 NAMPTP1-201ENST00000440465 2514 ntBASIC5.34□□□□□ -1.56
SNED1Q8TER0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNED1Q8TER0 RLIMP1-201ENST00000339626 1680 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SNED1Q8TER0 RNA5SP124-201ENST00000362739 110 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 RNA5SP513-201ENST00000364648 118 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 NPM1P10-201ENST00000398310 865 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 AL592291.1-201ENST00000403830 352 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 AL080315.1-201ENST00000406055 466 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.33□□□□□ -1.56
SNED1Q8TER0 OR2AH1P-201ENST00000425717 928 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 RPL37P1-201ENST00000432310 284 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 UBE2V1P3-201ENST00000439651 417 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 RPS29P7-201ENST00000439662 171 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 MRPL48P1-201ENST00000445390 636 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.33□□□□□ -1.56
SNED1Q8TER0 AL162151.2-201ENST00000448875 158 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.33□□□□□ -1.56
SNED1Q8TER0 RPS20P4-201ENST00000461659 355 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 RPS27AP17-201ENST00000463344 455 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 RNA5SP303-201ENST00000516192 130 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 AC105233.3-201ENST00000531125 744 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 DYNLL1P4-201ENST00000549314 266 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.33□□□□□ -1.56
SNED1Q8TER0 ADAD1P2-201ENST00000588476 646 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 AL583832.1-201ENST00000603227 784 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 AL162574.2-201ENST00000614618 657 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 AC112484.5-201ENST00000624189 228 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNED1Q8TER0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.33□□□□□ -1.56
SNED1Q8TER0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
SNED1Q8TER0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNED1Q8TER0 MTCO1P46-201ENST00000451639 1491 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SNED1Q8TER0 AP005435.3-201ENST00000531260 3198 ntBASIC5.33□□□□□ -1.56
SNED1Q8TER0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.33□□□□□ -1.56
SNED1Q8TER0 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SNED1Q8TER0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 RNU1-83P-201ENST00000363426 164 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 SNORA74C-2-201ENST00000411179 201 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 CBX1P3-201ENST00000413296 527 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 COX6B1P7-201ENST00000430845 235 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 NMNAT1P2-201ENST00000435192 860 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 RNA5SP246-201ENST00000458909 119 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 AC090602.1-201ENST00000469695 252 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SNED1Q8TER0 AC146944.2-203ENST00000502493 354 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 NPM1P41-201ENST00000512920 831 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 AC139495.1-202ENST00000513164 354 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 AC019227.1-201ENST00000526902 510 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 EIF4EP5-201ENST00000528228 640 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 AC092451.2-201ENST00000538746 658 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 AL355816.2-201ENST00000610049 647 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 AL603750.1-201ENST00000624216 1717 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SNED1Q8TER0 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 MFSD8-242ENST00000641690 4199 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 AC106871.1-201ENST00000568324 3102 ntBASIC5.32□□□□□ -1.56
SNED1Q8TER0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.32□□□□□ -1.56
SNED1Q8TER0 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms