Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 RPL21P65-201ENST00000406094 466 ntBASIC6.57□□□□□ -1.36
VPS8Q8N3P4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.57□□□□□ -1.36
VPS8Q8N3P4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 DYNLL1P4-201ENST00000549314 266 ntBASIC6.57□□□□□ -1.36
VPS8Q8N3P4 AC103968.1-201ENST00000557841 573 ntBASIC6.57□□□□□ -1.36
VPS8Q8N3P4 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 AL031666.3-201ENST00000609320 1006 ntBASIC6.57□□□□□ -1.36
VPS8Q8N3P4 TCP1P3-201ENST00000414406 1498 ntBASIC6.57□□□□□ -1.36
VPS8Q8N3P4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VPS8Q8N3P4 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VPS8Q8N3P4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
VPS8Q8N3P4 ERCC6-202ENST00000374127 1782 ntBASIC6.56□□□□□ -1.36
VPS8Q8N3P4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VPS8Q8N3P4 MIR372-201ENST00000362225 67 ntBASIC6.56□□□□□ -1.36
VPS8Q8N3P4 RPS23P10-201ENST00000416185 486 ntBASIC6.56□□□□□ -1.36
VPS8Q8N3P4 AC115285.1-201ENST00000424879 736 ntBASIC6.56□□□□□ -1.36
VPS8Q8N3P4 AC073335.1-201ENST00000427776 363 ntBASIC6.56□□□□□ -1.36
VPS8Q8N3P4 AL606490.8-201ENST00000441624 319 ntBASIC6.56□□□□□ -1.36
VPS8Q8N3P4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC6.56□□□□□ -1.36
VPS8Q8N3P4 AL132838.2-201ENST00000492041 314 ntBASIC6.56□□□□□ -1.36
VPS8Q8N3P4 RN7SL703P-201ENST00000578485 302 ntBASIC6.56□□□□□ -1.36
VPS8Q8N3P4 SS18L2P2-201ENST00000583960 235 ntBASIC6.56□□□□□ -1.36
VPS8Q8N3P4 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.56□□□□□ -1.36
VPS8Q8N3P4 BNIP3P41-202ENST00000616656 861 ntBASIC6.56□□□□□ -1.36
VPS8Q8N3P4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.56□□□□□ -1.36
VPS8Q8N3P4 MIR7154-201ENST00000620673 73 ntBASIC6.56□□□□□ -1.36
VPS8Q8N3P4 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VPS8Q8N3P4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 ENSAP1-201ENST00000392855 326 ntBASIC6.55□□□□□ -1.36
VPS8Q8N3P4 AL161631.1-201ENST00000417933 486 ntBASIC6.55□□□□□ -1.36
VPS8Q8N3P4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.55□□□□□ -1.36
VPS8Q8N3P4 AL358176.3-201ENST00000420757 454 ntBASIC6.55□□□□□ -1.36
VPS8Q8N3P4 RCC2P2-201ENST00000422174 918 ntBASIC6.55□□□□□ -1.36
VPS8Q8N3P4 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 HSFY6P-201ENST00000445573 403 ntBASIC6.55□□□□□ -1.36
VPS8Q8N3P4 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 PSMC1P13-201ENST00000458195 985 ntBASIC6.55□□□□□ -1.36
VPS8Q8N3P4 KRT19P6-201ENST00000510983 209 ntBASIC6.55□□□□□ -1.36
VPS8Q8N3P4 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 AC108064.1-201ENST00000513791 460 ntBASIC6.55□□□□□ -1.36
VPS8Q8N3P4 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.55□□□□□ -1.36
VPS8Q8N3P4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.55□□□□□ -1.36
VPS8Q8N3P4 AL049840.6-202ENST00000603373 279 ntBASIC6.55□□□□□ -1.36
VPS8Q8N3P4 AC092653.1-201ENST00000608509 531 ntBASIC6.55□□□□□ -1.36
VPS8Q8N3P4 AC138907.10-201ENST00000623708 983 ntBASIC6.55□□□□□ -1.36
VPS8Q8N3P4 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
VPS8Q8N3P4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC6.54□□□□□ -1.36
VPS8Q8N3P4 MAPK10-303ENST00000641324 3959 ntBASIC6.54□□□□□ -1.36
VPS8Q8N3P4 MUC2-202ENST00000613187 4845 ntBASIC6.54□□□□□ -1.36
VPS8Q8N3P4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VPS8Q8N3P4 SPRR2C-201ENST00000290702 219 ntBASIC6.54□□□□□ -1.36
VPS8Q8N3P4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VPS8Q8N3P4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VPS8Q8N3P4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC6.54□□□□□ -1.36
VPS8Q8N3P4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VPS8Q8N3P4 PDSS1P1-201ENST00000422953 1114 ntBASIC6.54□□□□□ -1.36
VPS8Q8N3P4 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.54□□□□□ -1.36
VPS8Q8N3P4 AC006011.1-201ENST00000442758 349 ntBASIC6.54□□□□□ -1.36
VPS8Q8N3P4 GEMIN8P3-201ENST00000445417 720 ntBASIC6.54□□□□□ -1.36
VPS8Q8N3P4 AC068993.1-201ENST00000546724 589 ntBASIC6.54□□□□□ -1.36
VPS8Q8N3P4 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.54□□□□□ -1.36
VPS8Q8N3P4 AC010608.2-201ENST00000624830 470 ntBASIC6.54□□□□□ -1.36
VPS8Q8N3P4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
VPS8Q8N3P4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
VPS8Q8N3P4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VPS8Q8N3P4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
VPS8Q8N3P4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VPS8Q8N3P4 AC027228.2-201ENST00000567141 2154 ntBASIC6.54□□□□□ -1.36
VPS8Q8N3P4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
VPS8Q8N3P4 OR11H4-201ENST00000315409 1082 ntBASIC6.53□□□□□ -1.36
VPS8Q8N3P4 IL6STP1-201ENST00000346911 1020 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms