Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 RN7SKP92-201ENST00000517266 244 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AP005119.2-201ENST00000579735 1105 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC069061.3-201ENST00000582254 823 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC005520.3-201ENST00000602874 370 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AL133247.2-201ENST00000603236 482 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 IMMP1LP1-201ENST00000605170 488 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 COX6CP4-201ENST00000605798 228 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AL136295.6-201ENST00000610486 658 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AL133243.1-201ENST00000614487 366 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC091948.2-201ENST00000636510 279 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AL163152.1-201ENST00000642001 374 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC097461.1-201ENST00000568928 2821 ntBASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.23□□□□□ -1.73
C9orf40Q8IXQ3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 VN2R3P-201ENST00000422626 1412 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 MIR129-1-201ENST00000384972 72 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 MTND4LP14-201ENST00000429447 288 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 HMGB3P10-201ENST00000434734 572 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AC073587.1-201ENST00000447093 876 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 RNA5SP360-201ENST00000516555 118 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 RNU6-889P-201ENST00000517189 103 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AC134698.5-201ENST00000519444 336 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AP003168.1-201ENST00000530091 307 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 RPL12P25-202ENST00000598100 674 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 SNX6P1-201ENST00000601728 1224 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AC068790.4-201ENST00000602474 263 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AC008782.1-201ENST00000603386 430 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AC093765.1-201ENST00000603758 881 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AC008745.1-201ENST00000604064 271 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 MIR6748-201ENST00000610433 71 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AL162574.2-201ENST00000614618 657 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AC234782.5-201ENST00000617723 324 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AP003499.2-201ENST00000624100 483 ntBASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
C9orf40Q8IXQ3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.21□□□□□ -1.73
C9orf40Q8IXQ3 DDX6P1-205ENST00000441966 1436 ntBASIC4.21□□□□□ -1.73
C9orf40Q8IXQ3 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.21□□□□□ -1.73
C9orf40Q8IXQ3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.21□□□□□ -1.74
C9orf40Q8IXQ3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms