Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4□□□□□ -1.77
LRRC28Q86X40 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
LRRC28Q86X40 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4□□□□□ -1.77
LRRC28Q86X40 HNRNPKP5-201ENST00000515300 253 ntBASIC4□□□□□ -1.77
LRRC28Q86X40 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4□□□□□ -1.77
LRRC28Q86X40 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4□□□□□ -1.77
LRRC28Q86X40 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4□□□□□ -1.77
LRRC28Q86X40 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4□□□□□ -1.77
LRRC28Q86X40 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4□□□□□ -1.77
LRRC28Q86X40 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4□□□□□ -1.77
LRRC28Q86X40 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4□□□□□ -1.77
LRRC28Q86X40 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4□□□□□ -1.77
LRRC28Q86X40 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4□□□□□ -1.77
LRRC28Q86X40 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4□□□□□ -1.77
LRRC28Q86X40 AC098935.2-201ENST00000604222 466 ntBASIC4□□□□□ -1.77
LRRC28Q86X40 AC010201.1-201ENST00000605051 540 ntBASIC4□□□□□ -1.77
LRRC28Q86X40 MIR6820-201ENST00000611508 62 ntBASIC4□□□□□ -1.77
LRRC28Q86X40 AC026368.1-201ENST00000614934 690 ntBASIC4□□□□□ -1.77
LRRC28Q86X40 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4□□□□□ -1.77
LRRC28Q86X40 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4□□□□□ -1.77
LRRC28Q86X40 MIR4727-201ENST00000622232 55 ntBASIC4□□□□□ -1.77
LRRC28Q86X40 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4□□□□□ -1.77
LRRC28Q86X40 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4□□□□□ -1.77
LRRC28Q86X40 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
LRRC28Q86X40 RLIMP2-201ENST00000427891 1563 ntBASIC4□□□□□ -1.77
LRRC28Q86X40 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4□□□□□ -1.77
LRRC28Q86X40 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
LRRC28Q86X40 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
LRRC28Q86X40 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
LRRC28Q86X40 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC28Q86X40 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC28Q86X40 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC28Q86X40 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 AC079741.1-201ENST00000321498 212 ntBASIC3.99□□□□□ -1.77
LRRC28Q86X40 MIR192-201ENST00000384915 110 ntBASIC3.99□□□□□ -1.77
LRRC28Q86X40 CYB5AP4-201ENST00000396692 399 ntBASIC3.99□□□□□ -1.77
LRRC28Q86X40 NCSTNP1-201ENST00000406229 144 ntBASIC3.99□□□□□ -1.77
LRRC28Q86X40 RPS16P5-201ENST00000406501 404 ntBASIC3.99□□□□□ -1.77
LRRC28Q86X40 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 PRELID3BP10-201ENST00000431957 584 ntBASIC3.99□□□□□ -1.77
LRRC28Q86X40 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC28Q86X40 ELOCP18-201ENST00000434209 337 ntBASIC3.99□□□□□ -1.77
LRRC28Q86X40 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 AL138878.2-201ENST00000440581 1241 ntBASIC3.99□□□□□ -1.77
LRRC28Q86X40 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC28Q86X40 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC28Q86X40 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 AC090819.1-201ENST00000523800 1111 ntBASIC3.99□□□□□ -1.77
LRRC28Q86X40 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 UBTFL9-201ENST00000534504 1148 ntBASIC3.99□□□□□ -1.77
LRRC28Q86X40 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 AC137768.1-201ENST00000549998 553 ntBASIC3.99□□□□□ -1.77
LRRC28Q86X40 CR383656.6-201ENST00000550518 394 ntBASIC3.99□□□□□ -1.77
LRRC28Q86X40 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 AC073137.1-201ENST00000605636 634 ntBASIC3.99□□□□□ -1.77
LRRC28Q86X40 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC28Q86X40 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.99□□□□□ -1.77
LRRC28Q86X40 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC28Q86X40 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC28Q86X40 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LRRC28Q86X40 AL442639.1-201ENST00000625030 1899 ntBASIC3.98□□□□□ -1.77
LRRC28Q86X40 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRRC28Q86X40 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
LRRC28Q86X40 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRRC28Q86X40 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.98□□□□□ -1.77
LRRC28Q86X40 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LRRC28Q86X40 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
LRRC28Q86X40 RNA5SP502-201ENST00000362694 119 ntBASIC3.98□□□□□ -1.77
LRRC28Q86X40 RNA5SP513-201ENST00000364648 118 ntBASIC3.98□□□□□ -1.77
LRRC28Q86X40 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRRC28Q86X40 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
LRRC28Q86X40 RPS4XP9-201ENST00000405151 780 ntBASIC3.98□□□□□ -1.77
LRRC28Q86X40 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.98□□□□□ -1.77
LRRC28Q86X40 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.98□□□□□ -1.77
LRRC28Q86X40 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRRC28Q86X40 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.98□□□□□ -1.77
LRRC28Q86X40 TRIM60P17-201ENST00000415181 719 ntBASIC3.98□□□□□ -1.77
LRRC28Q86X40 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC3.98□□□□□ -1.77
LRRC28Q86X40 CYCSP11-201ENST00000436426 315 ntBASIC3.98□□□□□ -1.77
LRRC28Q86X40 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRC28Q86X40 RPL36AP15-201ENST00000444514 266 ntBASIC3.98□□□□□ -1.77
LRRC28Q86X40 AC073264.2-201ENST00000448886 166 ntBASIC3.98□□□□□ -1.77
LRRC28Q86X40 RNU7-157P-201ENST00000459600 66 ntBASIC3.98□□□□□ -1.77
LRRC28Q86X40 RPL23AP2-201ENST00000471227 466 ntBASIC3.98□□□□□ -1.77
LRRC28Q86X40 AC098799.3-201ENST00000506095 438 ntBASIC3.98□□□□□ -1.77
LRRC28Q86X40 AC091868.1-201ENST00000508746 304 ntBASIC3.98□□□□□ -1.77
LRRC28Q86X40 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRC28Q86X40 AP006289.1-201ENST00000538089 277 ntBASIC3.98□□□□□ -1.77
LRRC28Q86X40 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.98□□□□□ -1.77
LRRC28Q86X40 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms