Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHFQ7M4L6 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHFQ7M4L6 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHFQ7M4L6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 MTND4P13-201ENST00000402078 1023 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 AL513175.2-201ENST00000422071 443 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC009238.2-201ENST00000431026 355 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC064862.4-201ENST00000442180 334 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 MTCYBP42-201ENST00000444653 1130 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 AL589880.1-201ENST00000448271 287 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 RPS6P2-201ENST00000454208 705 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 AL591473.1-201ENST00000464297 313 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC007998.1-201ENST00000474156 672 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 HMGB1P19-201ENST00000517578 577 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 IGKV2D-10-201ENST00000520194 281 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC112191.2-201ENST00000522428 333 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC009097.3-201ENST00000563557 1018 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 CYP2C60P-201ENST00000566088 139 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 FO393422.1-201ENST00000603908 708 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC018695.5-201ENST00000605872 315 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC107952.2-201ENST00000606048 486 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC010245.2-201ENST00000606908 1167 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 AL138478.1-201ENST00000612252 832 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 AC021755.4-201ENST00000616620 456 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 BX005214.3-202ENST00000619809 325 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHFQ7M4L6 AL691477.1-201ENST00000624398 162 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHFQ7M4L6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHFQ7M4L6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SHFQ7M4L6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHFQ7M4L6 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHFQ7M4L6 MTND4P8-201ENST00000514997 1362 ntBASIC4.64□□□□□ -1.67
SHFQ7M4L6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHFQ7M4L6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHFQ7M4L6 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHFQ7M4L6 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHFQ7M4L6 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHFQ7M4L6 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHFQ7M4L6 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHFQ7M4L6 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 RNU6-249P-201ENST00000363016 102 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 SNORA62.2-201ENST00000364672 152 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHFQ7M4L6 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 AL136310.1-201ENST00000404926 654 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 RPL23AP19-201ENST00000436229 369 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 MTCO2P20-201ENST00000437339 673 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 AP000936.3-201ENST00000438127 255 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC073052.1-201ENST00000440417 714 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC068135.1-201ENST00000446164 246 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 AL035551.1-201ENST00000446931 348 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 RPL31P44-201ENST00000447680 377 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC084754.1-201ENST00000463466 464 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 NDUFA5P5-201ENST00000468361 342 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC004815.1-201ENST00000484185 331 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC104687.1-201ENST00000485829 412 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHFQ7M4L6 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC093534.1-201ENST00000504977 132 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC091860.1-201ENST00000505723 432 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC008565.1-201ENST00000509046 885 ntBASIC4.63□□□□□ -1.67
SHFQ7M4L6 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.63□□□□□ -1.67
SHFQ7M4L6 AC105031.1-201ENST00000518550 476 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms