Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VPS13CQ709C8 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 MAPK10-303ENST00000641324 3959 ntBASIC3.39□□□□□ -1.87
VPS13CQ709C8 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS13CQ709C8 AC104260.2-201ENST00000623551 3497 ntBASIC3.39□□□□□ -1.87
VPS13CQ709C8 AC073346.2-201ENST00000624724 2058 ntBASIC3.39□□□□□ -1.87
VPS13CQ709C8 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS13CQ709C8 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 MIR921-201ENST00000401133 56 ntBASIC3.39□□□□□ -1.87
VPS13CQ709C8 AC010374.1-201ENST00000503762 1237 ntBASIC3.39□□□□□ -1.87
VPS13CQ709C8 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VPS13CQ709C8 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 YPEL5P2-201ENST00000605553 359 ntBASIC3.39□□□□□ -1.87
VPS13CQ709C8 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS13CQ709C8 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
VPS13CQ709C8 AC027228.2-201ENST00000567141 2154 ntBASIC3.39□□□□□ -1.87
VPS13CQ709C8 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS13CQ709C8 AC116667.1-201ENST00000604855 2072 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS13CQ709C8 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 SNORD3H-201ENST00000384486 214 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 EIF1P3-201ENST00000423841 334 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 AC091178.1-203ENST00000584586 279 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 SRGNP1-201ENST00000603392 451 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 AL353726.1-201ENST00000614041 1000 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 AL590806.1-201ENST00000415818 853 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 AC108032.1-201ENST00000416706 207 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 AC062016.2-201ENST00000420950 676 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 AL606490.9-201ENST00000603331 271 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 AC010680.3-201ENST00000604215 520 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 AL159169.3-201ENST00000608871 561 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS13CQ709C8 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VPS13CQ709C8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS13CQ709C8 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 U1.1-201ENST00000384101 164 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 AC245052.5-201ENST00000416320 649 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VPS13CQ709C8 AC006011.1-201ENST00000442758 349 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 CYCSP53-201ENST00000455540 265 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 MTND6P6-201ENST00000478031 263 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 AC090136.1-201ENST00000520009 240 ntBASIC3.38□□□□□ -1.87
VPS13CQ709C8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VPS13CQ709C8 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS13CQ709C8 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VPS13CQ709C8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS13CQ709C8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS13CQ709C8 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS13CQ709C8 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS13CQ709C8 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS13CQ709C8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS13CQ709C8 SUMO2P19-201ENST00000518920 295 ntBASIC3.37□□□□□ -1.87
VPS13CQ709C8 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS13CQ709C8 MTND5P1-201ENST00000445440 1375 ntBASIC3.37□□□□□ -1.87
VPS13CQ709C8 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.37□□□□□ -1.87
VPS13CQ709C8 RPL7P58-201ENST00000402913 758 ntBASIC3.37□□□□□ -1.87
VPS13CQ709C8 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 AL049873.1-201ENST00000480540 376 ntBASIC3.37□□□□□ -1.87
VPS13CQ709C8 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS13CQ709C8 AC115621.1-201ENST00000604653 858 ntBASIC3.37□□□□□ -1.87
VPS13CQ709C8 AP000648.2-201ENST00000624182 404 ntBASIC3.37□□□□□ -1.87
VPS13CQ709C8 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.37□□□□□ -1.87
VPS13CQ709C8 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS13CQ709C8 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS13CQ709C8 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms