Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 SNORA64.1-201ENST00000362600 132 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 MIR551A-201ENST00000385042 96 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 MIR1271-201ENST00000408537 86 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AC073310.1-201ENST00000423226 1033 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AC008065.1-201ENST00000428525 348 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 TXNP5-201ENST00000441043 315 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 RPS26P30-201ENST00000443431 335 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AC133473.1-201ENST00000455173 299 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 RPL7P45-201ENST00000455851 743 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 RPL37P6-202ENST00000464216 403 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AL133445.1-201ENST00000467051 452 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 CYCSP20-201ENST00000473154 315 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AC090686.1-201ENST00000481577 749 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 RPL21P47-201ENST00000483696 477 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 DUTP7-201ENST00000507982 486 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 HMGB3P16-201ENST00000508037 287 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AC008628.1-201ENST00000508663 265 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 RN7SKP46-201ENST00000515942 234 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AC093510.2-201ENST00000562820 896 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AC106734.1-201ENST00000568646 663 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AC022884.2-201ENST00000578535 580 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 EIF1P5-201ENST00000585002 234 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 MIR4443-201ENST00000585052 53 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AC098483.2-201ENST00000603158 454 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AC013244.1-201ENST00000604279 193 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 FRG1HP-204ENST00000617940 757 ntBASIC4.55□□□□□ -1.68
C11orf88Q6PI97 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.55□□□□□ -1.68
C11orf88Q6PI97 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.54□□□□□ -1.68
C11orf88Q6PI97 AL512283.1-201ENST00000606756 1384 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.54□□□□□ -1.68
C11orf88Q6PI97 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
C11orf88Q6PI97 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
C11orf88Q6PI97 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
C11orf88Q6PI97 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.54□□□□□ -1.68
C11orf88Q6PI97 DCAF13P3-201ENST00000561147 1334 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
C11orf88Q6PI97 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.54□□□□□ -1.68
C11orf88Q6PI97 SNORD56.4-201ENST00000363883 71 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 PRRC2CP1-201ENST00000404428 159 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 RPL23AP48-201ENST00000406913 488 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 NPM1P4-201ENST00000414095 812 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.54□□□□□ -1.68
C11orf88Q6PI97 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
C11orf88Q6PI97 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.54□□□□□ -1.68
C11orf88Q6PI97 AL662874.1-201ENST00000426065 230 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 FTH1P6-201ENST00000430768 320 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 LYPLA1P1-201ENST00000434514 622 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 AL627308.1-201ENST00000435693 821 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 GAPDHP58-201ENST00000438477 1006 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.54□□□□□ -1.68
C11orf88Q6PI97 AC233982.1-201ENST00000451247 436 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.54□□□□□ -1.68
C11orf88Q6PI97 AL591473.1-201ENST00000464297 313 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
C11orf88Q6PI97 AC078857.1-201ENST00000469870 667 ntBASIC4.54□□□□□ -1.68
C11orf88Q6PI97 SIAH1P1-201ENST00000479411 923 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms