Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 PDCD5P1-201ENST00000543528 309 ntBASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 AC069061.3-201ENST00000582254 823 ntBASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 RPL26P30-202ENST00000602923 645 ntBASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 AC084373.1-201ENST00000603311 235 ntBASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 AC005191.1-201ENST00000603950 358 ntBASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 AC133552.5-201ENST00000604266 540 ntBASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 AL133338.2-201ENST00000604292 736 ntBASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 AC073137.1-201ENST00000605636 634 ntBASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 AC090948.2-201ENST00000607363 564 ntBASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 OR7A19P-201ENST00000608051 733 ntBASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 AC100847.1-201ENST00000611316 481 ntBASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
H3F3CQ6NXT2 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AL031119.1-201ENST00000404707 1879 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 OR14L1P-202ENST00000641545 3009 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AC008549.2-201ENST00000333482 706 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 RNU1-94P-201ENST00000362627 173 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 Z98745.1-201ENST00000402553 494 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AC004690.1-201ENST00000418216 328 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 EIF4HP2-201ENST00000424380 563 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 ELOCP10-201ENST00000440624 327 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 ARL2BPP10-201ENST00000446487 531 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 EIF2S2P5-201ENST00000457635 968 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 SCARNA10-201ENST00000459255 330 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AP000827.1-201ENST00000527814 258 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AC084783.1-201ENST00000565846 910 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 ELOCP34-201ENST00000604436 327 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AL137246.1-201ENST00000607072 977 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AC145207.9-201ENST00000623802 325 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AC079298.2-201ENST00000623885 459 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 AC007342.7-201ENST00000624610 2337 ntBASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
H3F3CQ6NXT2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AL137100.1-201ENST00000556703 1620 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AC092435.4-201ENST00000623012 4159 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AC126755.2-208ENST00000327792 462 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AC138969.1-213ENST00000331436 462 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 SNORA71.2-201ENST00000364941 134 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 RNU6-225P-201ENST00000384613 103 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 RPS24P12-201ENST00000402084 394 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 RNU6-603P-201ENST00000411403 107 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 RAB28P1-201ENST00000411517 641 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 TRIM60P17-201ENST00000415181 719 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 RPEP3-201ENST00000425462 676 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 RPL18P10-201ENST00000425606 538 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 AC004938.1-201ENST00000438468 308 ntBASIC4.29□□□□□ -1.72
H3F3CQ6NXT2 SEPT7P6-201ENST00000469999 1143 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms