Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AL354984.3-201ENST00000604803 325 ntBASIC3.94□□□□□ -1.78
FOXF1Q12946 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.94□□□□□ -1.78
FOXF1Q12946 AL021997.2-201ENST00000615674 271 ntBASIC3.94□□□□□ -1.78
FOXF1Q12946 AC007546.1-201ENST00000619452 559 ntBASIC3.94□□□□□ -1.78
FOXF1Q12946 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXF1Q12946 AP003497.2-201ENST00000624220 967 ntBASIC3.94□□□□□ -1.78
FOXF1Q12946 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.94□□□□□ -1.78
FOXF1Q12946 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.94□□□□□ -1.78
FOXF1Q12946 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
FOXF1Q12946 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXF1Q12946 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXF1Q12946 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
FOXF1Q12946 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXF1Q12946 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXF1Q12946 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXF1Q12946 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXF1Q12946 AC105074.1-201ENST00000623380 3095 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
FOXF1Q12946 RNA5SP175-201ENST00000364275 119 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 RNA5SP509-201ENST00000364577 119 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXF1Q12946 RANP7-201ENST00000418085 644 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 UBTFL3-201ENST00000418934 1024 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXF1Q12946 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXF1Q12946 RPL18P10-201ENST00000425606 538 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 TMX2P1-201ENST00000436507 708 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXF1Q12946 UBTFL6-201ENST00000477929 1024 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.93□□□□□ -1.78
FOXF1Q12946 OR51K1P-201ENST00000510214 950 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 AC093840.1-201ENST00000511599 336 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXF1Q12946 C1GALT1P3-201ENST00000522049 819 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXF1Q12946 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
FOXF1Q12946 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.93□□□□□ -1.78
FOXF1Q12946 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
FOXF1Q12946 AC090515.3-201ENST00000560431 315 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXF1Q12946 AC021483.2-201ENST00000567415 758 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.93□□□□□ -1.78
FOXF1Q12946 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
FOXF1Q12946 MIR7641-1-201ENST00000627518 61 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXF1Q12946 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXF1Q12946 EIF2AP4-201ENST00000424793 1781 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
FOXF1Q12946 CDY11P-201ENST00000447168 1651 ntBASIC3.93□□□□□ -1.78
FOXF1Q12946 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
FOXF1Q12946 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.93□□□□□ -1.78
FOXF1Q12946 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXF1Q12946 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.93□□□□□ -1.78
FOXF1Q12946 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
FOXF1Q12946 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
FOXF1Q12946 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
FOXF1Q12946 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
FOXF1Q12946 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
FOXF1Q12946 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
FOXF1Q12946 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXF1Q12946 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXF1Q12946 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
FOXF1Q12946 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC3.92□□□□□ -1.78
FOXF1Q12946 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXF1Q12946 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXF1Q12946 SNORA11F-201ENST00000408237 128 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 RNU4-25P-201ENST00000410569 230 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 RPL21P108-201ENST00000413857 481 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 GTF2IP2-201ENST00000424290 697 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXF1Q12946 RPS29P17-201ENST00000430795 166 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 RPL7P33-201ENST00000444159 742 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXF1Q12946 AC002553.2-201ENST00000453217 340 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 RPL7P22-201ENST00000466005 733 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXF1Q12946 AC010374.1-201ENST00000503762 1237 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.92□□□□□ -1.78
FOXF1Q12946 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXF1Q12946 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXF1Q12946 AC100770.1-201ENST00000532310 322 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXF1Q12946 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.92□□□□□ -1.78
FOXF1Q12946 AC119501.1-201ENST00000603646 475 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 AC025175.1-201ENST00000606482 759 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 AC023509.5-201ENST00000617434 807 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 AC009237.17-201ENST00000618111 748 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 AL121890.3-201ENST00000618494 516 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXF1Q12946 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.92□□□□□ -1.78
FOXF1Q12946 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.92□□□□□ -1.78
FOXF1Q12946 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
FOXF1Q12946 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
FOXF1Q12946 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
FOXF1Q12946 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
FOXF1Q12946 AC027228.2-201ENST00000567141 2154 ntBASIC3.92□□□□□ -1.78
FOXF1Q12946 KPNA2P2-201ENST00000419546 1489 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms