Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 SNORA62.2-201ENST00000364672 152 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 SNORA70-201ENST00000384436 135 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AL121834.1-202ENST00000404494 277 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 USP9YP19-201ENST00000412165 485 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC013404.1-201ENST00000413068 249 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 ATG4AP1-201ENST00000416893 538 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 BMS1P13-201ENST00000417301 885 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 TRGV6-201ENST00000417928 299 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC093162.1-201ENST00000419682 124 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 EIF4HP2-201ENST00000424380 563 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 CKS1BP6-201ENST00000424932 240 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 IPMKP1-201ENST00000425988 855 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 MTATP6P11-201ENST00000428071 670 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC073508.1-201ENST00000428866 656 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC004938.1-201ENST00000438468 308 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 MYO5BP2-201ENST00000449815 1277 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 RPS20P4-201ENST00000461659 355 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 RPL7AP28-201ENST00000464513 571 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC090114.3-201ENST00000479267 829 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC147055.3-201ENST00000510547 851 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC138938.1-201ENST00000515431 782 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 SNORA31.13-201ENST00000516624 135 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 RNA5SP34-201ENST00000516887 130 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 RN7SKP147-201ENST00000517154 244 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 RNU6-709P-201ENST00000517257 104 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 RN7SL176P-201ENST00000580352 264 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 MIR4691-201ENST00000583764 85 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 PSMA6P4-201ENST00000603247 718 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AL671309.1-201ENST00000603750 544 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AP001521.2-201ENST00000608772 546 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 MIR1264-201ENST00000616374 69 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC024023.1-201ENST00000624530 922 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 AC024341.1-201ENST00000526444 1552 ntBASIC3.19□□□□□ -1.9
SYCNQ0VAF6 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SYCNQ0VAF6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 RNU6-252P-201ENST00000363232 107 ntBASIC3.18□□□□□ -1.9
SYCNQ0VAF6 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 RNU6-171P-201ENST00000384354 107 ntBASIC3.18□□□□□ -1.9
SYCNQ0VAF6 MIR708-201ENST00000390708 88 ntBASIC3.18□□□□□ -1.9
SYCNQ0VAF6 HMGB1P10-201ENST00000395823 563 ntBASIC3.18□□□□□ -1.9
SYCNQ0VAF6 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 AL357515.1-201ENST00000402967 542 ntBASIC3.18□□□□□ -1.9
SYCNQ0VAF6 AP000580.1-201ENST00000404439 358 ntBASIC3.18□□□□□ -1.9
SYCNQ0VAF6 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 RN7SKP213-201ENST00000410746 298 ntBASIC3.18□□□□□ -1.9
SYCNQ0VAF6 XKRYP4-201ENST00000414395 483 ntBASIC3.18□□□□□ -1.9
SYCNQ0VAF6 E2F6P2-201ENST00000420708 748 ntBASIC3.18□□□□□ -1.9
SYCNQ0VAF6 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 RGS17P1-201ENST00000423358 553 ntBASIC3.18□□□□□ -1.9
SYCNQ0VAF6 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.18□□□□□ -1.9
SYCNQ0VAF6 AL035458.1-201ENST00000433096 585 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms