Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
H3F3AP84243 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
H3F3AP84243 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
H3F3AP84243 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4□□□□□ -1.77
H3F3AP84243 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
H3F3AP84243 MIR448-201ENST00000362131 111 ntBASIC4□□□□□ -1.77
H3F3AP84243 RNU1-108P-201ENST00000362556 161 ntBASIC4□□□□□ -1.77
H3F3AP84243 RNA5-8SP7-201ENST00000363443 155 ntBASIC4□□□□□ -1.77
H3F3AP84243 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
H3F3AP84243 AL160275.2-201ENST00000412010 394 ntBASIC4□□□□□ -1.77
H3F3AP84243 AC069213.2-201ENST00000420238 366 ntBASIC4□□□□□ -1.77
H3F3AP84243 AC004448.2-201ENST00000422360 586 ntBASIC4□□□□□ -1.77
H3F3AP84243 RPL7AP25-201ENST00000423357 805 ntBASIC4□□□□□ -1.77
H3F3AP84243 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4□□□□□ -1.77
H3F3AP84243 NPM1P26-201ENST00000426339 738 ntBASIC4□□□□□ -1.77
H3F3AP84243 RPS12P10-201ENST00000427031 377 ntBASIC4□□□□□ -1.77
H3F3AP84243 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4□□□□□ -1.77
H3F3AP84243 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4□□□□□ -1.77
H3F3AP84243 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4□□□□□ -1.77
H3F3AP84243 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4□□□□□ -1.77
H3F3AP84243 RN7SL41P-201ENST00000476144 297 ntBASIC4□□□□□ -1.77
H3F3AP84243 F11-205ENST00000492972 1204 ntTSL 2 BASIC4□□□□□ -1.77
H3F3AP84243 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4□□□□□ -1.77
H3F3AP84243 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4□□□□□ -1.77
H3F3AP84243 AF186190.1-201ENST00000517470 480 ntBASIC4□□□□□ -1.77
H3F3AP84243 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4□□□□□ -1.77
H3F3AP84243 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4□□□□□ -1.77
H3F3AP84243 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4□□□□□ -1.77
H3F3AP84243 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4□□□□□ -1.77
H3F3AP84243 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4□□□□□ -1.77
H3F3AP84243 AC027455.1-201ENST00000574104 594 ntBASIC4□□□□□ -1.77
H3F3AP84243 AC093765.1-201ENST00000603758 881 ntBASIC4□□□□□ -1.77
H3F3AP84243 AC010201.1-201ENST00000605051 540 ntBASIC4□□□□□ -1.77
H3F3AP84243 AC026979.4-201ENST00000606555 645 ntBASIC4□□□□□ -1.77
H3F3AP84243 AC012409.3-201ENST00000611343 981 ntBASIC4□□□□□ -1.77
H3F3AP84243 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4□□□□□ -1.77
H3F3AP84243 AP000346.3-201ENST00000622821 210 ntBASIC4□□□□□ -1.77
H3F3AP84243 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4□□□□□ -1.77
H3F3AP84243 AC015908.5-201ENST00000623289 343 ntBASIC4□□□□□ -1.77
H3F3AP84243 AC006065.6-201ENST00000625201 545 ntBASIC4□□□□□ -1.77
H3F3AP84243 OR2L1P-202ENST00000641567 1023 ntBASIC4□□□□□ -1.77
H3F3AP84243 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
H3F3AP84243 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4□□□□□ -1.77
H3F3AP84243 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4□□□□□ -1.77
H3F3AP84243 AL592182.3-201ENST00000642132 3304 ntBASIC4□□□□□ -1.77
H3F3AP84243 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
H3F3AP84243 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4□□□□□ -1.77
H3F3AP84243 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4□□□□□ -1.77
H3F3AP84243 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
H3F3AP84243 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
H3F3AP84243 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
H3F3AP84243 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.99□□□□□ -1.77
H3F3AP84243 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
H3F3AP84243 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
H3F3AP84243 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
H3F3AP84243 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.99□□□□□ -1.77
H3F3AP84243 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
H3F3AP84243 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.99□□□□□ -1.77
H3F3AP84243 RNA5SP307-201ENST00000362863 116 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 AC019155.1-201ENST00000382242 574 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 RNU1-63P-201ENST00000383902 164 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 RNU6-178P-201ENST00000384631 104 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 MIR195-201ENST00000385194 87 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 MIR3065-201ENST00000390137 79 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 SNORA11B-201ENST00000408175 129 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 SNORA74C-2-201ENST00000411179 201 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 RPL26P29-201ENST00000415623 438 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
H3F3AP84243 ARAFP1-201ENST00000422172 605 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.99□□□□□ -1.77
H3F3AP84243 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.99□□□□□ -1.77
H3F3AP84243 RPL12P28-201ENST00000430852 489 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 RPL23AP25-201ENST00000430973 463 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 CDY14P-201ENST00000431260 1014 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
H3F3AP84243 CDY12P-201ENST00000440679 1015 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.99□□□□□ -1.77
H3F3AP84243 CDY13P-201ENST00000445813 1015 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.99□□□□□ -1.77
H3F3AP84243 CDY23P-201ENST00000451661 1014 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.99□□□□□ -1.77
H3F3AP84243 APOOP2-201ENST00000461561 539 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 RPL5P30-201ENST00000465511 891 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 AC096741.1-201ENST00000472250 846 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 RN7SL817P-201ENST00000480777 288 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 RN7SL205P-201ENST00000490174 284 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 RNA5SP497-201ENST00000516081 97 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.99□□□□□ -1.77
H3F3AP84243 NPM1P6-201ENST00000521088 871 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.99□□□□□ -1.77
H3F3AP84243 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
H3F3AP84243 MIR4700-201ENST00000578311 74 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 AC020915.5-201ENST00000596836 964 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 AP001160.4-201ENST00000596971 382 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 RPL12P25-202ENST00000598100 674 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 AC103792.1-201ENST00000603591 919 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.99□□□□□ -1.77
H3F3AP84243 RN7SL722P-201ENST00000617780 284 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 RN7SL565P-201ENST00000618246 284 ntBASIC3.99□□□□□ -1.77
H3F3AP84243 AC009704.2-201ENST00000618739 483 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms