Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AL355433.1-201ENST00000422804 300 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX6-1P78426 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.21□□□□□ -1.58
NKX6-1P78426 REREP2Y-201ENST00000439103 200 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.21□□□□□ -1.58
NKX6-1P78426 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX6-1P78426 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NKX6-1P78426 AL512605.1-202ENST00000441919 381 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
NKX6-1P78426 AL359955.2-201ENST00000445380 353 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX6-1P78426 AL445466.1-201ENST00000448432 357 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX6-1P78426 AC097262.1-201ENST00000452559 548 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.21□□□□□ -1.58
NKX6-1P78426 RPL21P71-201ENST00000465598 459 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 AL122020.1-201ENST00000472287 459 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 RPL30P6-201ENST00000475925 342 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX6-1P78426 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX6-1P78426 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NKX6-1P78426 AP000648.1-201ENST00000529682 397 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX6-1P78426 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.21□□□□□ -1.58
NKX6-1P78426 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
NKX6-1P78426 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.21□□□□□ -1.58
NKX6-1P78426 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 AC119403.2-201ENST00000590960 598 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.21□□□□□ -1.58
NKX6-1P78426 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.21□□□□□ -1.58
NKX6-1P78426 AC123786.2-201ENST00000603459 275 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 SUMO2P15-201ENST00000604285 278 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.21□□□□□ -1.58
NKX6-1P78426 AL354760.1-201ENST00000608357 643 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NKX6-1P78426 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NKX6-1P78426 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NKX6-1P78426 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.21□□□□□ -1.58
NKX6-1P78426 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
NKX6-1P78426 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
NKX6-1P78426 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.21□□□□□ -1.58
NKX6-1P78426 AC025125.1-201ENST00000624743 1922 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 AL355834.1-201ENST00000556602 3965 ntBASIC5.21□□□□□ -1.58
NKX6-1P78426 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NKX6-1P78426 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX6-1P78426 CDR1-202ENST00000625883 1485 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX6-1P78426 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NKX6-1P78426 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NKX6-1P78426 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NKX6-1P78426 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
NKX6-1P78426 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.2□□□□□ -1.58
NKX6-1P78426 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX6-1P78426 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
NKX6-1P78426 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
NKX6-1P78426 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX6-1P78426 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NKX6-1P78426 OR9K1P-201ENST00000326513 941 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 GAPDHP24-201ENST00000328713 983 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
NKX6-1P78426 RN7SKP160-201ENST00000363804 340 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 RNU1-146P-201ENST00000364015 165 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
NKX6-1P78426 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
NKX6-1P78426 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.2□□□□□ -1.58
NKX6-1P78426 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
NKX6-1P78426 PEX12P1-201ENST00000400284 1048 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 AP000534.2-201ENST00000412729 568 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 RPS6P23-201ENST00000413224 722 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 AC016907.1-201ENST00000419483 435 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.2□□□□□ -1.58
NKX6-1P78426 RNGTTP1-201ENST00000420965 728 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 RPL34P3-201ENST00000421454 338 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX6-1P78426 AC233981.1-201ENST00000423224 461 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.2□□□□□ -1.58
NKX6-1P78426 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX6-1P78426 BX323845.3-201ENST00000428215 527 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 RPL37P1-201ENST00000432310 284 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 AL627308.1-201ENST00000435693 821 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC5.2□□□□□ -1.58
NKX6-1P78426 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.2□□□□□ -1.58
NKX6-1P78426 AC009961.3-201ENST00000449832 765 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 RPL23AP15-201ENST00000450202 459 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 AC108463.1-201ENST00000450258 347 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX6-1P78426 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX6-1P78426 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
NKX6-1P78426 RPL7P1-201ENST00000468161 747 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 RPL7P9-201ENST00000468715 747 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NKX6-1P78426 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.2□□□□□ -1.58
NKX6-1P78426 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 UBA52P3-201ENST00000491303 382 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NKX6-1P78426 AC147055.4-201ENST00000504399 745 ntBASIC5.2□□□□□ -1.58
NKX6-1P78426 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.2□□□□□ -1.58
NKX6-1P78426 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.2□□□□□ -1.58
NKX6-1P78426 AC117532.1-201ENST00000514638 323 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms