Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.89□□□□□ -1.63
TPM4P67936 AL135786.2-201ENST00000608422 615 ntBASIC4.89□□□□□ -1.63
TPM4P67936 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.89□□□□□ -1.63
TPM4P67936 AC233309.1-201ENST00000619522 751 ntBASIC4.89□□□□□ -1.63
TPM4P67936 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.89□□□□□ -1.63
TPM4P67936 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
TPM4P67936 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TPM4P67936 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
TPM4P67936 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.88□□□□□ -1.63
TPM4P67936 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
TPM4P67936 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TPM4P67936 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.88□□□□□ -1.63
TPM4P67936 VPS35P1-201ENST00000563400 1518 ntBASIC4.88□□□□□ -1.63
TPM4P67936 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TPM4P67936 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TPM4P67936 RNA5SP502-201ENST00000362694 119 ntBASIC4.88□□□□□ -1.63
TPM4P67936 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.88□□□□□ -1.63
TPM4P67936 COX6B1P1-201ENST00000415962 213 ntBASIC4.88□□□□□ -1.63
TPM4P67936 AL161631.1-201ENST00000417933 486 ntBASIC4.88□□□□□ -1.63
TPM4P67936 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TPM4P67936 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.88□□□□□ -1.63
TPM4P67936 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.88□□□□□ -1.63
TPM4P67936 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.88□□□□□ -1.63
TPM4P67936 CEACAMP7-201ENST00000444105 496 ntBASIC4.88□□□□□ -1.63
TPM4P67936 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.88□□□□□ -1.63
TPM4P67936 RPL23AP43-201ENST00000446445 471 ntBASIC4.88□□□□□ -1.63
TPM4P67936 RPSAP50-201ENST00000481955 852 ntBASIC4.88□□□□□ -1.63
TPM4P67936 UBA52P3-201ENST00000491303 382 ntBASIC4.88□□□□□ -1.63
TPM4P67936 AC146944.2-203ENST00000502493 354 ntBASIC4.88□□□□□ -1.63
TPM4P67936 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.88□□□□□ -1.63
TPM4P67936 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.88□□□□□ -1.63
TPM4P67936 AC006499.3-201ENST00000506077 748 ntBASIC4.88□□□□□ -1.63
TPM4P67936 AC106872.4-201ENST00000510050 523 ntBASIC4.88□□□□□ -1.63
TPM4P67936 AC147055.3-201ENST00000510547 851 ntBASIC4.88□□□□□ -1.63
TPM4P67936 AC139495.1-202ENST00000513164 354 ntBASIC4.88□□□□□ -1.63
TPM4P67936 snoU109.6-201ENST00000516831 118 ntBASIC4.88□□□□□ -1.63
TPM4P67936 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.88□□□□□ -1.63
TPM4P67936 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.88□□□□□ -1.63
TPM4P67936 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.88□□□□□ -1.63
TPM4P67936 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.88□□□□□ -1.63
TPM4P67936 AC012146.2-201ENST00000576545 416 ntBASIC4.88□□□□□ -1.63
TPM4P67936 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.88□□□□□ -1.63
TPM4P67936 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.88□□□□□ -1.63
TPM4P67936 MIR6768-201ENST00000610734 72 ntBASIC4.88□□□□□ -1.63
TPM4P67936 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
TPM4P67936 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TPM4P67936 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.88□□□□□ -1.63
TPM4P67936 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.87□□□□□ -1.63
TPM4P67936 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TPM4P67936 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TPM4P67936 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.87□□□□□ -1.63
TPM4P67936 AC009302.1-201ENST00000417147 390 ntBASIC4.87□□□□□ -1.63
TPM4P67936 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.87□□□□□ -1.63
TPM4P67936 AL355433.1-201ENST00000422804 300 ntBASIC4.87□□□□□ -1.63
TPM4P67936 MTND2P11-201ENST00000423638 648 ntBASIC4.87□□□□□ -1.63
TPM4P67936 AL138787.1-202ENST00000437804 898 ntBASIC4.87□□□□□ -1.63
TPM4P67936 RPSAP41-201ENST00000439695 860 ntBASIC4.87□□□□□ -1.63
TPM4P67936 EEF1B2P5-201ENST00000444820 548 ntBASIC4.87□□□□□ -1.63
TPM4P67936 SUMO2P1-206ENST00000445436 284 ntBASIC4.87□□□□□ -1.63
TPM4P67936 AC063943.1-201ENST00000465434 453 ntBASIC4.87□□□□□ -1.63
TPM4P67936 RN7SL101P-201ENST00000496350 279 ntBASIC4.87□□□□□ -1.63
TPM4P67936 IGLVIV-53-201ENST00000520107 367 ntBASIC4.87□□□□□ -1.63
TPM4P67936 IGKV3D-34-201ENST00000522638 302 ntBASIC4.87□□□□□ -1.63
TPM4P67936 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.87□□□□□ -1.63
TPM4P67936 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.87□□□□□ -1.63
TPM4P67936 AC005000.1-201ENST00000536192 288 ntBASIC4.87□□□□□ -1.63
TPM4P67936 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.87□□□□□ -1.63
TPM4P67936 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.87□□□□□ -1.63
TPM4P67936 AC124068.1-201ENST00000563131 678 ntBASIC4.87□□□□□ -1.63
TPM4P67936 MIR3176-201ENST00000582210 90 ntBASIC4.87□□□□□ -1.63
TPM4P67936 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.87□□□□□ -1.63
TPM4P67936 AC098935.2-201ENST00000604222 466 ntBASIC4.87□□□□□ -1.63
TPM4P67936 AC087468.1-201ENST00000604365 630 ntBASIC4.87□□□□□ -1.63
TPM4P67936 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.87□□□□□ -1.63
TPM4P67936 AC015922.4-201ENST00000612568 690 ntBASIC4.87□□□□□ -1.63
TPM4P67936 AL359715.5-201ENST00000623431 443 ntBASIC4.87□□□□□ -1.63
TPM4P67936 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.87□□□□□ -1.63
TPM4P67936 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TPM4P67936 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.87□□□□□ -1.63
TPM4P67936 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.87□□□□□ -1.63
TPM4P67936 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TPM4P67936 SDAD1P1-202ENST00000524156 2051 ntBASIC4.87□□□□□ -1.63
TPM4P67936 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.87□□□□□ -1.63
TPM4P67936 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TPM4P67936 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
TPM4P67936 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.86□□□□□ -1.63
TPM4P67936 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TPM4P67936 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.86□□□□□ -1.63
TPM4P67936 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
TPM4P67936 AC018555.1-201ENST00000567548 1980 ntBASIC4.86□□□□□ -1.63
TPM4P67936 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TPM4P67936 AL607077.1-201ENST00000401718 499 ntBASIC4.86□□□□□ -1.63
TPM4P67936 ZNF603P-201ENST00000405613 487 ntBASIC4.86□□□□□ -1.63
TPM4P67936 RN7SKP100-201ENST00000411258 284 ntBASIC4.86□□□□□ -1.63
TPM4P67936 EIF1P3-201ENST00000423841 334 ntBASIC4.86□□□□□ -1.63
TPM4P67936 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
TPM4P67936 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.86□□□□□ -1.63
TPM4P67936 RPEP2-201ENST00000432149 701 ntBASIC4.86□□□□□ -1.63
TPM4P67936 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.86□□□□□ -1.63
TPM4P67936 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms