Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.6□□□□□ -1.67
SEC61A1P61619 HMGN1P9-201ENST00000515212 298 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 AC138938.1-201ENST00000515431 782 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A1P61619 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.6□□□□□ -1.67
SEC61A1P61619 DUXAP6-201ENST00000553858 601 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 AL442163.2-201ENST00000553912 710 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A1P61619 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.6□□□□□ -1.67
SEC61A1P61619 AC023813.2-201ENST00000564321 469 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A1P61619 MIR1269B-201ENST00000580405 75 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 AC069366.1-201ENST00000583159 838 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
SEC61A1P61619 AC000068.2-201ENST00000608816 460 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 AC037198.3-201ENST00000616754 526 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 AC123767.1-202ENST00000620407 817 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 AC010435.1-201ENST00000623353 1177 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.6□□□□□ -1.67
SEC61A1P61619 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.6□□□□□ -1.67
SEC61A1P61619 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.6□□□□□ -1.67
SEC61A1P61619 AC090897.3-201ENST00000636973 1157 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SEC61A1P61619 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
SEC61A1P61619 NXF4-202ENST00000416098 1465 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SEC61A1P61619 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 ZNF733P-202ENST00000444809 1573 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SEC61A1P61619 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SEC61A1P61619 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 AC021242.1-201ENST00000507315 2035 ntBASIC4.6□□□□□ -1.67
SEC61A1P61619 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.6□□□□□ -1.67
SEC61A1P61619 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SEC61A1P61619 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
SEC61A1P61619 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A1P61619 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SEC61A1P61619 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A1P61619 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SEC61A1P61619 RN7SKP6-201ENST00000364795 319 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A1P61619 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.59□□□□□ -1.67
SEC61A1P61619 MIR142-201ENST00000384835 87 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 MIR551A-201ENST00000385042 96 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A1P61619 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AC009804.1-201ENST00000400949 179 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 AL136131.1-201ENST00000406079 803 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 EIF4A1P1-201ENST00000420241 934 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 AC007161.1-204ENST00000423039 460 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A1P61619 RPS4XP16-201ENST00000427198 791 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 VN1R108P-201ENST00000431580 830 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AC073052.1-201ENST00000440417 714 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.59□□□□□ -1.67
SEC61A1P61619 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AC235565.1-201ENST00000456962 1325 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 USP9YP25-201ENST00000457708 443 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
SEC61A1P61619 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A1P61619 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A1P61619 BET1P1-201ENST00000482276 359 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AC079203.1-201ENST00000487972 404 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A1P61619 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A1P61619 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A1P61619 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.59□□□□□ -1.67
SEC61A1P61619 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A1P61619 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AC011611.5-201ENST00000552477 578 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.59□□□□□ -1.67
SEC61A1P61619 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.59□□□□□ -1.67
SEC61A1P61619 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AP005403.1-201ENST00000579720 229 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.59□□□□□ -1.67
SEC61A1P61619 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SEC61A1P61619 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AC010620.1-201ENST00000601088 1102 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 AC015726.1-201ENST00000602353 681 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 AC025165.5-201ENST00000602802 578 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.59□□□□□ -1.67
SEC61A1P61619 AP000648.2-201ENST00000624182 404 ntBASIC4.59□□□□□ -1.67
SEC61A1P61619 AL512506.2-201ENST00000624472 458 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms