Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.33□□□□□ -1.72
VSX2P58304 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
VSX2P58304 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.33□□□□□ -1.72
VSX2P58304 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.33□□□□□ -1.72
VSX2P58304 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.33□□□□□ -1.72
VSX2P58304 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.33□□□□□ -1.72
VSX2P58304 ADAD1P2-201ENST00000588476 646 ntBASIC4.33□□□□□ -1.72
VSX2P58304 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.33□□□□□ -1.72
VSX2P58304 QTRT1P1-201ENST00000604344 1078 ntBASIC4.33□□□□□ -1.72
VSX2P58304 AL023583.1-201ENST00000607518 1143 ntBASIC4.33□□□□□ -1.72
VSX2P58304 AC009704.2-201ENST00000618739 483 ntBASIC4.33□□□□□ -1.72
VSX2P58304 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.33□□□□□ -1.72
VSX2P58304 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VSX2P58304 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
VSX2P58304 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.32□□□□□ -1.72
VSX2P58304 AC139713.2-214ENST00000642059 1811 ntBASIC4.32□□□□□ -1.72
VSX2P58304 OR51H2P-202ENST00000641424 3046 ntBASIC4.32□□□□□ -1.72
VSX2P58304 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VSX2P58304 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VSX2P58304 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VSX2P58304 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
VSX2P58304 VN2R3P-201ENST00000422626 1412 ntBASIC4.32□□□□□ -1.72
VSX2P58304 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VSX2P58304 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
VSX2P58304 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VSX2P58304 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
VSX2P58304 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VSX2P58304 OR52B1P-201ENST00000316506 909 ntBASIC4.32□□□□□ -1.72
VSX2P58304 RNA5SP447-201ENST00000363749 119 ntBASIC4.32□□□□□ -1.72
VSX2P58304 AC004690.1-201ENST00000418216 328 ntBASIC4.32□□□□□ -1.72
VSX2P58304 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.32□□□□□ -1.72
VSX2P58304 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.32□□□□□ -1.72
VSX2P58304 AP001324.1-201ENST00000428553 399 ntBASIC4.32□□□□□ -1.72
VSX2P58304 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.32□□□□□ -1.72
VSX2P58304 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.32□□□□□ -1.72
VSX2P58304 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.32□□□□□ -1.72
VSX2P58304 CYCSP42-201ENST00000450823 238 ntBASIC4.32□□□□□ -1.72
VSX2P58304 RPL23AP37-201ENST00000479658 549 ntBASIC4.32□□□□□ -1.72
VSX2P58304 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VSX2P58304 AC113430.1-201ENST00000506872 718 ntBASIC4.32□□□□□ -1.72
VSX2P58304 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.32□□□□□ -1.72
VSX2P58304 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.32□□□□□ -1.72
VSX2P58304 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.32□□□□□ -1.72
VSX2P58304 IGLVIV-65-201ENST00000517313 360 ntBASIC4.32□□□□□ -1.72
VSX2P58304 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.32□□□□□ -1.72
VSX2P58304 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.32□□□□□ -1.72
VSX2P58304 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.32□□□□□ -1.72
VSX2P58304 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.32□□□□□ -1.72
VSX2P58304 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.32□□□□□ -1.72
VSX2P58304 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.32□□□□□ -1.72
VSX2P58304 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.32□□□□□ -1.72
VSX2P58304 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.32□□□□□ -1.72
VSX2P58304 AL121839.1-201ENST00000556233 1185 ntBASIC4.32□□□□□ -1.72
VSX2P58304 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.32□□□□□ -1.72
VSX2P58304 MIR5096-201ENST00000583713 70 ntBASIC4.32□□□□□ -1.72
VSX2P58304 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.32□□□□□ -1.72
VSX2P58304 RPL26P30-202ENST00000602923 645 ntBASIC4.32□□□□□ -1.72
VSX2P58304 LINC00901.1-201ENST00000617252 152 ntBASIC4.32□□□□□ -1.72
VSX2P58304 AC234782.5-201ENST00000617723 324 ntBASIC4.32□□□□□ -1.72
VSX2P58304 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.32□□□□□ -1.72
VSX2P58304 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
VSX2P58304 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VSX2P58304 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
VSX2P58304 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VSX2P58304 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VSX2P58304 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.32□□□□□ -1.72
VSX2P58304 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VSX2P58304 AC093535.2-201ENST00000624769 2326 ntBASIC4.32□□□□□ -1.72
VSX2P58304 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.31□□□□□ -1.72
VSX2P58304 AC025031.4-201ENST00000621248 3271 ntBASIC4.31□□□□□ -1.72
VSX2P58304 AL450326.2-201ENST00000421913 1962 ntBASIC4.31□□□□□ -1.72
VSX2P58304 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.31□□□□□ -1.72
VSX2P58304 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.31□□□□□ -1.72
VSX2P58304 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.31□□□□□ -1.72
VSX2P58304 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
VSX2P58304 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.31□□□□□ -1.72
VSX2P58304 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
VSX2P58304 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.31□□□□□ -1.72
VSX2P58304 RNU6-729P-201ENST00000384399 107 ntBASIC4.31□□□□□ -1.72
VSX2P58304 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
VSX2P58304 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 RNA5SP146-201ENST00000410743 123 ntBASIC4.31□□□□□ -1.72
VSX2P58304 SNRPFP1-201ENST00000414761 252 ntBASIC4.31□□□□□ -1.72
VSX2P58304 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.31□□□□□ -1.72
VSX2P58304 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 RPS27AP7-201ENST00000422792 455 ntBASIC4.31□□□□□ -1.72
VSX2P58304 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
VSX2P58304 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.31□□□□□ -1.72
VSX2P58304 RPS26P2-201ENST00000440331 348 ntBASIC4.31□□□□□ -1.72
VSX2P58304 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.31□□□□□ -1.72
VSX2P58304 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.31□□□□□ -1.72
VSX2P58304 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.31□□□□□ -1.72
VSX2P58304 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.31□□□□□ -1.72
VSX2P58304 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms